JUSTUS2/Getting Started: Difference between revisions
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How this is done is described in a little more detail here: [[Running Calculations]] |
How this is done is described in a little more detail here: [[Running Calculations]] |
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== Get |
== Get Access to the Cluster == |
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Follow the registration process for the bwForCluster. → [[Registration/bwForCluster|How to Register for a bwForCluster]] |
Follow the registration process for the bwForCluster. → [[Registration/bwForCluster|How to Register for a bwForCluster]] |
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Training course → [https://training.bwhpc.de/ Linux course on training.bwhpc.de] |
Training course → [https://training.bwhpc.de/ Linux course on training.bwhpc.de] |
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== Transfer your |
== Transfer your Data to the Cluster == |
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Get familiar with available file systems on the cluster. → [[Hardware_and_Architecture_(bwForCluster_JUSTUS_2)#Storage_Architecture|File Systems]] |
Get familiar with available file systems on the cluster. → [[Hardware_and_Architecture_(bwForCluster_JUSTUS_2)#Storage_Architecture|File Systems]] |
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Transfer your data to the cluster using appropriate tools. → [[Data Transfer|Data Transfer]] |
Transfer your data to the cluster using appropriate tools. → [[Data Transfer|Data Transfer]] |
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== Find |
== Find Information About Installed Software and Examples == |
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Compiler, Libraries and application software are provided as software modules. Learn how to work with |
Compiler, Libraries and application software are provided as software modules. Learn how to work with |
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Run sample script from a pre-installed software (Software job examples in the page above) |
Run sample script from a pre-installed software (Software job examples in the page above) |
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== Submit your |
== Submit and Run your Software as a Batch Job == |
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Get familiar with available nodes types on the cluster. → [[Hardware_and_Architecture_(bwForCluster_JUSTUS_2)|Hardware and Architecture]] |
Get familiar with available nodes types on the cluster. → [[Hardware_and_Architecture_(bwForCluster_JUSTUS_2)|Hardware and Architecture]] |
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* → [[BwForCluster_JUSTUS_2_Slurm_HOWTO| extensive Slurm HOWTO on specific tasks]] |
* → [[BwForCluster_JUSTUS_2_Slurm_HOWTO| extensive Slurm HOWTO on specific tasks]] |
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== Acknowledge the |
== Acknowledge the Cluster == |
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Remember to mention the cluster in your publications. → [[bwForCluster JUSTUS 2 Acknowledgement|Acknowledgement]] |
Remember to mention the cluster in your publications. → [[bwForCluster JUSTUS 2 Acknowledgement|Acknowledgement]] |
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Revision as of 12:45, 10 September 2024
General Workflow of Running a Calculation
On a compute cluster, you do not simply run log in and your software, but you write a "job script" that contains all commands to run and process your job and send this into a waiting queue to be run on one of several hundred computers.
How this is done is described in a little more detail here: Running Calculations
Get Access to the Cluster
Follow the registration process for the bwForCluster. → How to Register for a bwForCluster
Login to the Cluster
Setup service password and 2FA token and login to the cluster. → Login JUSTUS2
Using the Linux Commandline
HPC Wiki (external site) → Introduction to Linux Commandline
Training course → Linux course on training.bwhpc.de
Transfer your Data to the Cluster
Get familiar with available file systems on the cluster. → File Systems
Transfer your data to the cluster using appropriate tools. → Data Transfer
Find Information About Installed Software and Examples
Compiler, Libraries and application software are provided as software modules. Learn how to work with software modules. → Software
Run sample script from a pre-installed software (Software job examples in the page above)
Submit and Run your Software as a Batch Job
Get familiar with available nodes types on the cluster. → Hardware and Architecture
Submit and monitor your jobs with Slurm commands.
- → Running Your Calculations - a very brief introduction.
- → extensive Slurm HOWTO on specific tasks
Acknowledge the Cluster
Remember to mention the cluster in your publications. → Acknowledgement