JUSTUS2/Getting Started: Difference between revisions
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* continue reading until you found that there are example job scripts: [[Environment_Modules#Software_job_examples]] |
* continue reading until you found that there are example job scripts: [[Environment_Modules#Software_job_examples]] |
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* submit a sample job from a software as mentioned in the job example. Also see: [[Slurm_JUSTUS_2]] |
* submit a sample job from a software as mentioned in the job example. Also see: [[Slurm_JUSTUS_2]] |
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* monitor your job: [[ |
* monitor your job: [[JUSTUS2/Slurm#Monitoring_Your_Jobs]] |
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* transfer your own data to the cluster: [[Data Transfer]] |
* transfer your own data to the cluster: [[Data Transfer]] |
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* adapt the sample job script to run your own job |
* adapt the sample job script to run your own job |
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Revision as of 15:22, 14 July 2022
Here is a short list of things you may need to do first when you get onto the cluster
- log in to the cluster: JUSTUS2/Login
- get accustomed with the linux commandline: exercises1 exercises2 exercises3
- scientific software: read on how to load Software Modules
- continue reading until you found that there are example job scripts: Environment_Modules#Software_job_examples
- submit a sample job from a software as mentioned in the job example. Also see: Slurm_JUSTUS_2
- monitor your job: JUSTUS2/Slurm#Monitoring_Your_Jobs
- transfer your own data to the cluster: Data Transfer
- adapt the sample job script to run your own job
Note that your jobs should not write/read much on the lustre filesystem while the job runs, but either use the ram disk in /tmp or request /scratch if the space of the ram disk isn't sufficient