JUSTUS2/Software/Orca
Description | Content |
---|---|
module load | chem/orca |
Availability | bwUniCluster | BwForCluster_Chemistry |
License | "Research group" license |
Citing | As described in the manual |
Links | ORCA Forum Homepage | Documentation |
Graphical Interface | No |
Included in module | mpi/openmpi/1.8-gnu-4.8 | mpi/openmpi/1.6.5-gnu-4.8 |
Description
ORCA is a modern electronic structure program package. It is a flexible, efficient and easy-to-use general purpose tool for quantum chemistry with specific emphasis on spectroscopic properties of open-shell molecules.
ORCA is able to carry out geometry optimizations and to predict a large number of spectroscopic parameters at different levels of theory. Besides the use of Hartee Fock theory, density functional theory (DFT) and semiempirical methods, high level ab initio quantum chemical methods, based on the configuration interaction and coupled cluster methods, are included into ORCA to an increasing degree.
Due to the user-friendly style, ORCA is considered to be a helpful tool not only for computational chemists, but also for chemists, physicists and biologists that are interested in developing the full information content of their experimental data with help of calculations.
Implemented Methods:
- Semiempirical INDO/S, MNDO, AM1, PM3, NDDO/1
- Hartee Fock theory (RHF, UHF, ROHF and CASSCF) all in direct, semidirect, or conventional mode, different RI approximations
- DFT including a reasonably large number of exchange and correlation functionals including hybrid DFT and the most recent double hybrid functionals (see below).
- High level single reference correlation models: CCSD(T), QCISD(T), CEPA, CPF (with and without RI, Local)
- High level ab-initio individual selecting multireference methods (MRCI, MRMP2, MRMP3, MRMP4, MRACPF, MRAQCC, SORCI, DDCI) for ground- and excited-states.
- Geometry optimization in redundant internal coordinates using analytical gradient techniques for all SCF methods as well as MP2.
- Excited state calculations via TD-DFT and CI-singles (CIS). For CIS an analytic gradient is also available. The doubles correction is available for CIS(D) in an efficient implementation.
- Scalar relativistic ZORA, IORA and Douglas-Kroll-Hess (DKH) approaches, picture change effects, all-electron basis sets, effective core potentials
- The COSMO model is available throughout the package for continuum dielectric modeling of the environment.
- QM/MM interface to GROMACS
- Double hybrid functionals including a fraction of nonlocal correlation. Analytic gradients are also available (these methods were invented by the Grimme group).
- Van der Waals correct density functionals.
For more information on features please visit The ORCA Portal of the Max-Planck Institute web page.
Versions and Availability
A list of versions currently available on all bwHPC-C5-Clusters can be obtained from the
Cluster Information System CIS
{{#widget:Iframe |url=https://cis-hpc.uni-konstanz.de/prod.cis/bwUniCluster/chem/orca |width=99% |height=200 |border=0 }} On the command line interface of any bwHPC cluster you'll get a list of available versions by using:
$ module avail chem/orca
License
The ORCA license is considered as a "Research group" license. Thus anyone who directly associated with your research group is covered by the license and may share your copy of ORCA on all computer resources of your group.
This license only applies to academic users. Commercial use of ORCA is prohibited under the terms of this license.
Complete ORCA Users License Agreement
Usage
Loading the module
You can load the default version of ORCA with the command
$ module load chem/orca module avail chem/orca ------------------------ /opt/bwhpc/common/modulefiles ---------------------- chem/orca/3.0.3 chem/orca/3.0.3-openmpi-1.6.5(default) $module load chem/orca
The module will try to load modules it needs to function (e.g. compiler/intel). If loading the module fails, check if you have already loaded one of those modules, but not in the version needed for Orca. If you wish to load a specific (older) version, you can do so using e.g. 'module load chem/orca/version' to load the version you desires.
$ module avail chem/orca ------------------------ /opt/bwhpc/common/modulefiles ------------------------- chem/orca/3.0.3 chem/orca/3.0.3-openmpi-1.6.5(default)$ module load chem/orca/3.0.1
Orca 3.0.3 mit OpenMPI 1.6.5 läuft stabiler!
Einige MPI-Abstürze sind nachweislich (gleicher Job) damit durchgelaufen.
Diese Version ist default.
Program Binaries
You can find the ORCA binaries in the main folder of the ORCA system. After loading the ORCA module (module load chem/orca/'version') this path is also set to the local $PATH- and $ORCA_BIN_DIR environments.
$ls -x $ORCA_BIN_DIR bwhpc-examples manual modulefiles orca orca_2aim orca_2mkl orca_anoint orca_anoint_mpi orca_asa orca_casscf orca_casscf_mpi orca_chelpg orca_ciprep orca_cis orca_cis_mpi orca_cleanup orca_cleanup_mpi orca_cpcasscf orca_cpscf orca_cpscf_mpi orca_eca orca_ecplib orca_eprnmr orca_eprnmr_mpi orca_euler orca_fci orca_fitpes orca_gstep orca_gtoint orca_gtoint_mpi orca_loc orca_mapspc orca_md orca_mdci orca_mdci_mpi orca_mergefrag orca_mp2 orca_mp2_mpi orca_mrci orca_mrci_mpi orca_ndoint orca_numfreq orca_pc orca_pc_mpi orca_plot orca_pltvib orca_pop orca_rel orca_rocis orca_rocis_mpi orca_scf orca_scfgrad orca_scfgrad_mpi orca_scfhess orca_scfhess_mpi orca_scf_mpi orca_soc orca_soc_mpi orca_vib orca_vpot otool_cosmo otool_gcp otool_smd $
Only the programs with the suffix *_mpi are compiled including OPENMPI functionality.
Disk Usage
Scratch files are written to the current directory by default. Please change to a local directory or to your local workspace (preferred) before starting your calculations.
'calc_repo' is an example name of a repository you created by using the command 'ws_allocate'.
$ cd $(ws_find calc_repo) 'your-id'-calc_repo-0]$ pwd /work/workspace/scratch/'your-id'-calc_repo-0 'your-id'-calc_repo-0]$
Examples
You can copy a simple interactive example to your workspace and run it, using 'msub'
$ cd $(ws_find calc_repo) $ cp $ORCA_EXA_DIR/bwhpc-orca-example.moab . $ cp bwhpc-orca-example.moab myorcajob.moab § vi myorcajob.moab # do your own modifications $ msub myorcajob.moab # start job submission
ORCA-Specific Environments
To see a list of all ORCA environments set by the 'module load chem/orca/version'-command, use 'env | grep ORCA' Or try the command 'module show 'chem/orca/version'.
$ module load chem/orca/3.0.3 $ env | grep ORCA ORCA_VERSION=3.0.3 ORCA_MAN_DIR=/opt/bwhpc/common/chem/orca/3.0.3/manual ORCA_EXA_DIR=/opt/bwhpc/common/chem/orca/3.0.3/bwhpc-examples ORCA_BIN_DIR=/opt/bwhpc/common/chem/orca/3.0.3 ORCA_HOME=/opt/bwhpc/common/chem/orca/3.0.3 $
Version-Specific Information
For a more detailed information specific to a specific ORCA version, see the information available via the module system with the command
$ module help chem/orca/'version'
For a small abstract what ORCA is about use the command
$ module whatis chem/orca/'version'
Example
$ module avail chem/orca ------------------------------ /opt/bwhpc/common/modulefiles --------------------------------------- chem/orca/3.0.1 chem/orca/3.0.3 $ module whatis chem/orca/3.0.1 chem/orca/3.0.1 : Quantum chemistry package ORCA, version 3.0.1 (command '/opt/bwhpc/common/chem/orca/3.0.1/orca') $ module help chem/orca/3.0.1 ----------- Module Specific Help for 'chem/orca/3.0.1' ------------ This module provides the quantum chemistry package ORCA version 3.0.1 via command '/opt/bwhpc/common/chem/orca/3.0.1/orca' [...] Documentation: * Max-Planck-Institut fuer Chemische Energiekonversion https://cec.mpg.de/forum/portal.php * New features for version 3.0.1 https://cec.mpg.de/forum/portal.php#a3 * Manuals in pdf format: /opt/bwhpc/common/chem/orca/3.0.1/manual * Example data and a Moab example script can be found here: /opt/bwhpc/common/chem/orca/3.0.1/bwhpc-examples [...] $