Difference between revisions of "Helix/Software"

Revision as of 17:25, 28 October 2022

Most software is provided as Environment Modules.

Visit https://www.bwhpc.de/software.php, select Cluster → bwForCluster Helix

On cluster: module avail

Documentation for environment modules is available on the cluster:

For some environment modules additional documentation is provided here.

@@ Line 1: / Line 1: @@
 == Environment Modules ==
-Most software is provided as Modules.
+Most software is provided as [[Environment Modules]].
-Required reading to use: [[Environment Modules]]
 == Available Software ==
@@ Line 9: / Line 7: @@
 On cluster: <code>module avail</code>
-== Documentation ==
+== Documentation on the Cluster ==
-Documentation by the cluster operators:
+Documentation for environment modules is available on the cluster:
+* with command <code>module help</code>
-{| style="width:100%;"
-|- style="background:#eeeeee;" |
-|  <code>module help</code> ||  See section: [[Environment_Modules#module_help]]
-|-  style="background:#dddddd; " |
-| examples in <code>$SOFTNAME_EXA_DIR</code> || See section: [[Environment_Modules#Software_job_examples]]
-|- style="background:#eeeeee; " |
-| this wiki || See below
-|}
-Availabe documentation for environment modules:
-* <code>module help</code>
 * examples in <code>$SOFTNAME_EXA_DIR</code>
-* additional docu in this wiki
 == Documentation in the Wiki ==
-Modules with additional documentation here in the wiki:
+For some environment modules additional documentation is provided here.
+* [[Helix/Software/Conda | Conda]]
+* [[Helix/Software/Matlab | Matlab]]
+* [[Helix/Software/R | R]]
+* [[Helix/Software/SAS | SAS ]]
+* [[Helix/Software/Singularity | Singularity]] (containers)
+* [[Helix/Software/Stata | Stata]]