JUSTUS2/Getting Started: Difference between revisions
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Here is a short list of things you may need to do first when you get onto the cluster |
Here is a short list of things you may need to do first when you get onto the cluster |
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== Basics == |
== Basics == |
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Note that your jobs should not write/read much on the lustre filesystem while the job runs, but either use the ram disk in /tmp or request /scratch if the space of the ram disk isn't sufficient. The [[BwForCluster_JUSTUS_2_Slurm_HOWTO#How_to_clean-up_or_save_files_before_a_job_times_out.3F| Slurm Howto]] shows how to copy and clean up your data from /tmp or /scratch at the end of the job |
Note that your jobs should not write/read much on the lustre filesystem while the job runs, but either use the ram disk in /tmp or request /scratch if the space of the ram disk isn't sufficient. The [[BwForCluster_JUSTUS_2_Slurm_HOWTO#How_to_clean-up_or_save_files_before_a_job_times_out.3F| Slurm Howto]] shows how to copy and clean up your data from /tmp or /scratch at the end of the job |
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== Get access to the cluster == |
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Follow the registration process for the bwForCluster. → [[Registration/bwForCluster|How to Register for a bwForCluster]] |
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== Login to the cluster == |
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Setup service password and 2FA token and login to the cluster. → [[JUSTUS2/Login|Login JUSTUS2]] |
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== Transfer your data to the cluster == |
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Get familiar with available file systems on the cluster. → [[Hardware_and_Architecture_(bwForCluster_JUSTUS_2)#Storage_Architecture|File Systems]] |
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Transfer your data to the cluster using appropriate tools. → [[Data Transfer|Data Transfer]] |
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== Find information about installed software and examples == |
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Compiler, Libraries and application software are provided as software modules. Learn how to work with software modules. → [[Software Modules]] |
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<!-- Overview of available software modules → [https://www.bwhpc.de/software.php https://www.bwhpc.de/software.php], select <code>Cluster → bwForCluster JUSTUS 2</code> --> |
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== Submit your application as a batch job == |
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Get familiar with available nodes types on the cluster. → [[Hardware_and_Architecture_(bwForCluster_JUSTUS_2)|Hardware and Architecture]] |
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Submit and monitor your jobs with Slurm commands. → [[JUSTUS2/Slurm|Batch System Slurm]] |
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== Acknowledge the cluster == |
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Remember to mention the cluster in your publications. → [[bwForCluster JUSTUS 2 Acknowledgement|Acknowledgement]] |
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Revision as of 15:59, 9 November 2022
Get access to the cluster
Follow the registration process for the bwForCluster. → How to Register for a bwForCluster
Login to the cluster
Setup service password and 2FA token and login to the cluster. → Login JUSTUS2
Transfer your data to the cluster
Get familiar with available file systems on the cluster. → File Systems
Transfer your data to the cluster using appropriate tools. → Data Transfer
Find information about installed software and examples
Compiler, Libraries and application software are provided as software modules. Learn how to work with software modules. → Software Modules
Submit your application as a batch job
Get familiar with available nodes types on the cluster. → Hardware and Architecture
Submit and monitor your jobs with Slurm commands. → Batch System Slurm
Acknowledge the cluster
Remember to mention the cluster in your publications. → Acknowledgement