JUSTUS2/Software: Difference between revisions
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Software documentation by the cluster operators is mainly provided in three forms: |
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Most software is provided as Modules. |
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* the <code>module help</code> of software modules |
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* examples in $SOFTNAME_EXA_DIR (replace SOFTNAME with name of the software) |
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* this wiki |
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Required reading to use: [[Environment Modules]] |
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For the first two forms of documentation, reading the page on |
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== Available Software == |
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is required |
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* Web: Visit [https://www.bwhpc.de/software.php https://www.bwhpc.de/software.php], select <code>Cluster → bwForCluster JUSTUS2</code> |
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* On the cluster: <code>module avail</code>[[Environment_Modules#module_help|(→module avail)]] |
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* Software in Containers :Instructions for loading software in containers: [[JUSTUS2/Software/Singularity|Singularity]] |
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== Documentation == |
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=== Main Documentation on The Cluster === |
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Documentation for environment modules available on the cluster (shown for a chemistry software called "softname"): |
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* with command <code>module help chem/softname</code> [[Environment_Modules#module_help|(→module help)]] |
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* examples in <code>$SOFTNAME_EXA_DIR</code> [[Environment_Modules#Software_job_examples|(→job examples)]] |
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=== Sometimes Additional Documentation in the Wiki === |
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For some environment modules additional documentation is provided here. |
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<!-- this list could be generated via {{Special:PrefixIndex/JUSTUS2/Software/|stripprefix=yes}} |
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but then these Pages become orphaned if there is no other link to them |
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--> |
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* [[JUSTUS2/Software/ADF|ADF]] |
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* [[JUSTUS2/Software/Dalton|Dalton]] |
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* [[JUSTUS2/Software/Gaussian|Gaussian]] |
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* [[JUSTUS2/Software/Gaussview|Gaussview]] |
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* [[JUSTUS2/Software/Molden|Molden]] |
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* [[JUSTUS2/Software/NAMD|NAMD]] |
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* [[JUSTUS2/Software/Orca|Orca]] |
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* [[JUSTUS2/Software/Quantum ESPRESSO|Quantum ESPRESSO]] |
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* [[JUSTUS2/Software/SIESTA|SIESTA]] |
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* [[JUSTUS2/Software/Schrodinger|Schrodinger]] |
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* [[JUSTUS2/Software/Turbomole|Turbomole]] |
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* [[JUSTUS2/Software/VASP|VASP]] |
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* [[JUSTUS2/Software/Julia|Julia]] |
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Latest revision as of 17:43, 5 November 2024
Environment Modules
Most software is provided as Modules.
Required reading to use: Environment Modules
Available Software
- Web: Visit https://www.bwhpc.de/software.php, select
Cluster → bwForCluster JUSTUS2
- On the cluster:
module avail(→module avail)
- Software in Containers :Instructions for loading software in containers: Singularity
Documentation
Main Documentation on The Cluster
Documentation for environment modules available on the cluster (shown for a chemistry software called "softname"):
- with command
module help chem/softname(→module help) - examples in
$SOFTNAME_EXA_DIR(→job examples)
Sometimes Additional Documentation in the Wiki
For some environment modules additional documentation is provided here.