Helix/Software: Difference between revisions
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== External Documentation == |
== External Documentation == |
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* '''BioStructureHub Heidelberg:''' Tutorials are provided for using Helix software modules like Alphafold, RFDiffusion etc. and related software on the Helix cluster and on [[Helix/bwVisu | bwVisu]]. |
* '''BioStructureHub Heidelberg:''' Tutorials are provided for using Helix software modules like Alphafold 2/3, RFDiffusion etc. and related software on the Helix cluster and on [[Helix/bwVisu | bwVisu]]. |
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*: → [https://github. |
*: → [https://ssciwr.github.io/BioStructureHub/tutorials/tutorial_AF3_bwVisu/#step-4-set-a-working-directory-and-upload-files Alphafold 3 and other Tutorials] |
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Latest revision as of 17:03, 27 October 2026
Environment Modules
Most software is provided as Environment Modules.
Available Software
Visit https://www.bwhpc.de/software.php, select Cluster → bwForCluster Helix
On the cluster: module avail
Documentation on the Cluster
Documentation for each environment module is available on the cluster:
- with command
module help - examples are in
$<SOFTNAME>_EXA_DIR(batch script + other needed input files). This environment variable is available as soon as the module is loaded.- Some modules, e.g. the Alphafold module, include an especially extensive example.
Documentation in the Wiki
For some environment modules additional documentation is provided here.
External Documentation
- BioStructureHub Heidelberg: Tutorials are provided for using Helix software modules like Alphafold 2/3, RFDiffusion etc. and related software on the Helix cluster and on bwVisu.