User contributions for K Kuck
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25 November 2025
- 16:4816:48, 25 November 2025 diff hist +8,177 N BwUniCluster3.0/Software/R/terra Created page with "<span style="color:red"><b>Note that the instructions provided below refer to R 4.5.1!</b></span> = General information = [https://rspatial.github.io/terra/ '''terra'''] is a R package for spatial data analysis with vectors (points, lines, polygons) and raster (grid) data. [https://github.com/r-spatial/sf '''sf'''] is a R package that provides [https://en.wikipedia.org/wiki/Simple_Features simple feature] access for R. In order to install those, we need to fulfill the..." current
- 16:2516:25, 25 November 2025 diff hist +30 BwUniCluster3.0/Software/R No edit summary current
17 July 2025
- 12:2212:22, 17 July 2025 diff hist +369 BwUniCluster3.0/Software/R No edit summary
- 12:2112:21, 17 July 2025 diff hist +85 BwUniCluster3.0/Software No edit summary current
- 12:0512:05, 17 July 2025 diff hist 0 R No edit summary
16 July 2025
- 18:1918:19, 16 July 2025 diff hist −11 BwUniCluster3.0/Software/R No edit summary
- 17:3717:37, 16 July 2025 diff hist +4,118 N BwUniCluster3.0/Software/R Created page with "{{Softwarepage|math/R}} {| width=600px class="wikitable" |- ! Description !! Content |- | module load | math/R |- | License | GPL |- | Citing | n/a |- | Links | [http://www.r-project.org/ Homepage] | [http://cran.r-project.org/manuals.html Documentation] |- | Graphical Interface | No |- | Plugins | User dependent |} = Description = '''R''' is a free and open-source statistical programming environment based on S, developed at Bell Laboratories (formerly AT&T, now..."
15 July 2025
- 10:2010:20, 15 July 2025 diff hist +3,182 N BwUniCluster3.0/Software/R/Rjags Created page with "= General information = rjags is an R interface to use JAGS, [https://mcmc-jags.sourceforge.io/ Just another Gibbs Sampler], a program for analysis of Bayesian hierarchical models using Markov Chain Monte Carlo (MCMC) simulation = Installation instructions = <code>rjags</code> needs a working JAGS installation. The following instructions will build and install JAGS 4.3.2 to <code>$JAGS_HOME</code> on bwUniCluster 3.0. First, in order to compile them on a compute node,..." current
25 November 2024
- 17:3217:32, 25 November 2024 diff hist +24 BwUniCluster2.0/Software/R No edit summary
30 October 2024
- 18:1318:13, 30 October 2024 diff hist 0 BwUniCluster2.0/Software/R/Rjags No edit summary current
- 18:0818:08, 30 October 2024 diff hist −1,316 BwUniCluster2.0/Software/R/Rstan No edit summary current
- 15:2315:23, 30 October 2024 diff hist 0 BwUniCluster2.0/Software/R/Rstan No edit summary
- 15:2015:20, 30 October 2024 diff hist +2 BwUniCluster2.0/Software/R/cummeRbund No edit summary current
- 15:1815:18, 30 October 2024 diff hist +108 BwUniCluster2.0/Software/R →Pre-installed R-packages
- 15:1315:13, 30 October 2024 diff hist −5 BwUniCluster2.0/Software/R/cummeRbund No edit summary
- 15:1215:12, 30 October 2024 diff hist +5,155 N BwUniCluster2.0/Software/R/cummeRbund Created page with "= General information = [https://rspatial.github.io/terra/ '''<code>CummeRbund</code>'''] is an <code>R</code> package designed to aid and simplify the task of analyzing Cufflinks RNA-Seq output. = Installation instructions = == Preparations == Installing <code>CummeRbund</code> involves compiling source code. Therefore, ensure that the following flags are set in <code>$HOME/.R/Makevars</code>: <pre> cat ~/.R/Makevars CXX14=g++ CXX17=g++ CXX14FLAGS += -std=c++14 C..."
- 15:1215:12, 30 October 2024 diff hist +44 BwUniCluster2.0/Software/R →Optional packages for R
- 11:3211:32, 30 October 2024 diff hist −10 BwUniCluster2.0/Software/R →Pre-installed R-packages
- 11:3211:32, 30 October 2024 diff hist +15 BwUniCluster2.0/Software/R →Pre-installed R-packages
- 11:3011:30, 30 October 2024 diff hist +51 BwUniCluster2.0/Software/R →Pre-installed R-packages
- 10:4810:48, 30 October 2024 diff hist −182 BwUniCluster2.0/Software/R/Glmnet →Install glmnet current Tag: Manual revert
28 October 2024
- 19:2819:28, 28 October 2024 diff hist +182 BwUniCluster2.0/Software/R/Glmnet →Install glmnet
- 18:4818:48, 28 October 2024 diff hist −1 BwUniCluster2.0/Software/R/Glmnet No edit summary
- 18:4818:48, 28 October 2024 diff hist −243 BwUniCluster2.0/Software/R/Glmnet No edit summary
- 18:3218:32, 28 October 2024 diff hist +442 BwUniCluster2.0/Software/R/Glmnet →Preparations
- 18:2818:28, 28 October 2024 diff hist −2 BwUniCluster2.0/Software/R/Glmnet No edit summary
- 18:2818:28, 28 October 2024 diff hist +502 BwUniCluster2.0/Software/R/Glmnet No edit summary
- 18:1718:17, 28 October 2024 diff hist −51 BwUniCluster2.0/Software/R/stringi No edit summary current
- 18:0418:04, 28 October 2024 diff hist −335 BwUniCluster2.0/Software/R/stringi →Testing the installation
- 18:0418:04, 28 October 2024 diff hist +61 BwUniCluster2.0/Software/R/stringi →Install the R package
- 18:0318:03, 28 October 2024 diff hist +328 BwUniCluster2.0/Software/R/stringi →Installing the R package
- 18:0018:00, 28 October 2024 diff hist −461 BwUniCluster2.0/Software/R/stringi →Preparations
- 17:5817:58, 28 October 2024 diff hist −9 BwUniCluster2.0/Software/R/stringi →Preparations
- 17:5717:57, 28 October 2024 diff hist +263 BwUniCluster2.0/Software/R/stringi No edit summary
- 17:5217:52, 28 October 2024 diff hist +16 BwUniCluster2.0/Software/R/stringi No edit summary
- 17:4417:44, 28 October 2024 diff hist −2 BwUniCluster2.0/Software/R/terra No edit summary current
- 17:4317:43, 28 October 2024 diff hist −6 BwUniCluster2.0/Software/R/terra No edit summary
- 17:4217:42, 28 October 2024 diff hist −1 BwUniCluster2.0/Software/R/terra No edit summary
- 17:4217:42, 28 October 2024 diff hist −22 BwUniCluster2.0/Software/R/terra No edit summary
- 17:4017:40, 28 October 2024 diff hist −36 BwUniCluster2.0/Software/R/terra →Preparations to use the terra and sf packages
- 17:4017:40, 28 October 2024 diff hist +52 BwUniCluster2.0/Software/R/terra →Preparations to use the terra and sf packages
- 17:3917:39, 28 October 2024 diff hist −3 BwUniCluster2.0/Software/R/terra →Installing the R packages
- 17:3817:38, 28 October 2024 diff hist +13 BwUniCluster2.0/Software/R/terra →Install GEOS
- 17:3817:38, 28 October 2024 diff hist +23 BwUniCluster2.0/Software/R/terra →Install GEOS
- 17:3617:36, 28 October 2024 diff hist −62 BwUniCluster2.0/Software/R/terra →Preparations
- 17:3517:35, 28 October 2024 diff hist −1 BwUniCluster2.0/Software/R/terra →Preparations
- 17:3517:35, 28 October 2024 diff hist +20 BwUniCluster2.0/Software/R/terra →Installation
- 17:3417:34, 28 October 2024 diff hist 0 BwUniCluster2.0/Software/R/terra →Preparations
- 17:3317:33, 28 October 2024 diff hist −65 BwUniCluster2.0/Software/R/terra →Installing the R packages
- 17:3117:31, 28 October 2024 diff hist +1 BwUniCluster2.0/Software/R/terra →Installing the R packages