Difference between revisions of "BwUniCluster2.0/Software/R/Glmnet"
< BwUniCluster2.0 | Software | R
(Created page with "= Installation instructions = Consider starting an interactive job for compiling. Copy and paste the following to your shell. <pre> # Load the R software module, e.g. module...") |
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Revision as of 19:09, 18 November 2021
Installation instructions
Consider starting an interactive job for compiling. Copy and paste the following to your shell.
# Load the R software module, e.g. module load math/R/4.1.2 # Prepare .R directory (if it does not already exists) mkdir -p ~/.R # Write the following environment variables to Makevars echo "CXX14=icpc" >> ~/.R/Makevars echo "CXX14FLAGS=-O3 -fPIC -std=c++14 -axCORE-AVX512,CORE-AVX2,AVX -xSSE4.2 -fp-model strict -qopenmp" >> ~/.R/Makevars # Install the glmnet package from within R session R -q > install.packages("glmnet", dependencies=TRUE) # Run a quick test > library(glmnet)