Difference between revisions of "BwUniCluster2.0/Software/R/Rstan"

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(Installation instructions)
(Installation instructions)
Line 5: Line 5:
 
<pre>
 
<pre>
   
  +
# Load the R software module, e.g.
  +
module load math/R/3.6.3
   
  +
# Prepare .R directory (if it does not already exists)
  +
mkdir -p ~/.R
   
  +
# to Makevars
 
  +
echo "CXX14=icpc" >>~/.R/Makevars
$ mkdir -p ~/.R
 
  +
echo "CXX14FLAGS=-O3 -fPIC -std=c++14 -axCORE-AVX512,CORE-AVX2,AVX -xSSE4.2 -fp-model strict -qopenmp" >> ~/.R/Makevars
$ echo "CXX14=icpc" >>~/.R/Makevars
 
$ echo "CXX14FLAGS=-O3 -fPIC -std=c++14 -axCORE-AVX512,CORE-AVX2,AVX -xSSE4.2 -fp-model strict -qopenmp" >> ~/.R/Makevars
 
$ module load math/R/3.6.3
 
   
   

Revision as of 15:09, 21 April 2021

Installation instructions

Consider starting an interactive job for compiling. Copy and paste the following to your shell.


# Load the R software module, e.g.
module load math/R/3.6.3

# Prepare .R directory (if it does not already exists)
mkdir -p ~/.R

# to Makevars
echo "CXX14=icpc" >>~/.R/Makevars
echo "CXX14FLAGS=-O3 -fPIC -std=c++14 -axCORE-AVX512,CORE-AVX2,AVX -xSSE4.2 -fp-model strict -qopenmp" >> ~/.R/Makevars