Difference between revisions of "BwUniCluster2.0/Batch System Migration Guide"

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=Serial Programs=
 
=Serial Programs=
   
* Use the time option ''-t'' or ''--time'' (instead of ''-l walltime''). If only one number is entered behind ''-t'', the default unit is minutes.
+
* Use the time option '''-t''' or ''--time'' (instead of ''-l walltime''). If only one number is entered behind ''-t'', the default unit is minutes.
 
* Use the option ''-n 1'' or ''--ntasks=1'' (instead of ''-l nodes=1,ppn=1'').
 
* Use the option ''-n 1'' or ''--ntasks=1'' (instead of ''-l nodes=1,ppn=1'').
 
* Use the option ''-m'' or ''--mem'' (instead of ''-l pmem''). The default unit is MegaByte.
 
* Use the option ''-m'' or ''--mem'' (instead of ''-l pmem''). The default unit is MegaByte.
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$ sbatch -p single -t 60 -n 1 -m 96327 ./job.sh
 
$ sbatch -p single -t 60 -n 1 -m 96327 ./job.sh
 
</pre>
 
</pre>
A serial program is started running 60 minutes exclusively on a batch node.
+
The script job.sh (containing the execution of a serial program) is started running 60 minutes exclusively on a batch node.
 
<br>
 
<br>
 
<br>
 
<br>
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=Multithreaded Programs=
 
=Multithreaded Programs=
   
* Use the time option ''-t'' or ''--time'' (instead of ''-l walltime''). If only one number is entered behind ''-t'', the default unit is minutes.
+
* Use the time option ''-t'' or ''--ime'' (instead of ''-l walltime''). If only one number is entered behind ''-t'', the default unit is minutes.
* Use the option ''-n 1'' or ''--ntasks=1'' (instead of ''-l nodes=1,ppn=1''). A number between 1 and 40 can be entered (because of 40 cores within one node); a number between 41 and 80 can also be entered (because of active hyperthreading).
+
* Use the option ''-N 1'' or ''--nodes=1'' and ''c (instead of ''-l nodes=1,ppn=...''). A number between 1 and 40 can be entered (because of 40 cores within one node); a number between 41 and 80 can also be entered (because of active hyperthreading).
 
* Use the option ''-m'' or ''--mem'' (instead of ''-l pmem''). The default unit is MegaByte.
 
* Use the option ''-m'' or ''--mem'' (instead of ''-l pmem''). The default unit is MegaByte.
 
* If you want to use one node exclusively, you must enter the whole memory (''-m 96327'' or ''--mem=96327'').
 
* If you want to use one node exclusively, you must enter the whole memory (''-m 96327'' or ''--mem=96327'').

Revision as of 12:20, 13 March 2020

1 Serial Programs

  • Use the time option -t or --time (instead of -l walltime). If only one number is entered behind -t, the default unit is minutes.
  • Use the option -n 1 or --ntasks=1 (instead of -l nodes=1,ppn=1).
  • Use the option -m or --mem (instead of -l pmem). The default unit is MegaByte.
  • If you want to use one node exclusively, you must enter the whole memory (-m 96327 or --mem=96327).


Example for a serial job

$ sbatch -p single -t 60 -n 1 -m 96327 ./job.sh 

The script job.sh (containing the execution of a serial program) is started running 60 minutes exclusively on a batch node.


2 Multithreaded Programs

  • Use the time option -t or --ime (instead of -l walltime). If only one number is entered behind -t, the default unit is minutes.
  • Use the option -N 1 or --nodes=1 and c (instead of -l nodes=1,ppn=...). A number between 1 and 40 can be entered (because of 40 cores within one node); a number between 41 and 80 can also be entered (because of active hyperthreading).
  • Use the option -m or --mem (instead of -l pmem). The default unit is MegaByte.
  • If you want to use one node exclusively, you must enter the whole memory (-m 96327 or --mem=96327).


Example for a serial job

$ sbatch -p single -t 60 -n 1 -m 96327 ./job.sh 

A serial program is started running 60 minutes exclusively on a batch node.