Difference between revisions of "JUSTUS2/Software"

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(Documentation in the Wiki)
(Available Software)
 
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== Available Software ==
 
== Available Software ==
Visit [https://www.bwhpc.de/software.php https://www.bwhpc.de/software.php], select <code>Cluster → bwForCluster JUSTUS2</code>
 
   
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* Web: Visit [https://www.bwhpc.de/software.php https://www.bwhpc.de/software.php], select <code>Cluster → bwForCluster JUSTUS2</code>
On cluster: <code>module avail</code>
 
   
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* On the cluster: <code>module avail</code>[[Environment_Modules#module_help|(→module avail)]]
== Documentation ==
 
Documentation by the cluster operators:
 
{| style="width:100%;"
 
|- style="background:#eeeeee;" |
 
| <code>module help</code> || See section: [[Environment_Modules#module_help]]
 
|- style="background:#dddddd; " |
 
| examples in <code>$SOFTNAME_EXA_DIR</code> || See section: [[Environment_Modules#Software_job_examples]]
 
|- style="background:#eeeeee; " |
 
| this wiki || See below
 
|}
 
   
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* Software in Containers :Instructions for loading software in containers: [[JUSTUS2/Software/Singularity|Singularity]]
== Documentation in the Wiki ==
 
Modules with additional documentation here in the wiki:
 
   
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== Documentation ==
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=== Main Documentation on The Cluster ===
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Documentation for environment modules available on the cluster (shown for a chemistry software called "softname"):
   
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* with command <code>module help chem/softname</code> [[Environment_Modules#module_help|(→module help)]]
* [[ADF]]
 
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* examples in <code>$SOFTNAME_EXA_DIR</code> [[Environment_Modules#Software_job_examples|(→job examples)]]
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=== Sometimes Additional Documentation in the Wiki ===
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For some environment modules additional documentation is provided here.
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<!-- this list could be generated via {{Special:PrefixIndex/JUSTUS2/Software/|stripprefix=yes}}
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but then these Pages become orphaned if there is no other link to them
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-->
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* [[JUSTUS2/Software/ADF|ADF]]
   
 
* [[JUSTUS2/Software/Dalton|Dalton]]
 
* [[JUSTUS2/Software/Dalton|Dalton]]
   
* [[Gaussian]]
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* [[JUSTUS2/Software/Gaussian|Gaussian]]
   
* [[Gaussview]]
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* [[JUSTUS2/Software/Gaussview|Gaussview]]
   
* [[Molden]]
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* [[JUSTUS2/Software/Molden|Molden]]
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* [[JUSTUS2/Software/NAMD|NAMD]]
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* [[JUSTUS2/Software/Orca|Orca]]
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* [[JUSTUS2/Software/Quantum ESPRESSO|Quantum ESPRESSO]]
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* [[JUSTUS2/Software/SIESTA|SIESTA]]
   
 
* [[JUSTUS2/Software/Schrodinger|Schrodinger]]
 
* [[JUSTUS2/Software/Schrodinger|Schrodinger]]
  +
  +
* [[JUSTUS2/Software/Turbomole|Turbomole]]
   
 
* [[JUSTUS2/Software/VASP|VASP]]
 
* [[JUSTUS2/Software/VASP|VASP]]

Latest revision as of 17:31, 29 February 2024

1 Environment Modules

Most software is provided as Modules.

Required reading to use: Environment Modules

2 Available Software

  • Software in Containers :Instructions for loading software in containers: Singularity

3 Documentation

3.1 Main Documentation on The Cluster

Documentation for environment modules available on the cluster (shown for a chemistry software called "softname"):

3.2 Sometimes Additional Documentation in the Wiki

For some environment modules additional documentation is provided here.