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Combined display of all available logs of bwHPC Wiki. You can narrow down the view by selecting a log type, the username (case-sensitive), or the affected page (also case-sensitive).

11:46, 27 February 2024 H Winkhardt (talk | contribs) moved page BwUniCluster 2.0 Python Dask to BwUniCluster2.0/Software/Python Dask without leaving a redirect
11:36, 27 February 2024 H Winkhardt (talk | contribs) deleted page Category:BwUniCluster 2.0/User Access (content was: "= Registration bwUniCluster = The bwUniCluster 2.0 is the universal cluster for tier 3 high performance computing (HPC) in...", and the only contributor was "M Janczyk" (talk))
13:37, 19 September 2023 H Winkhardt (talk | contribs) deleted page Queues (Pointed to BinAC only)
10:19, 20 June 2023 H Winkhardt (talk | contribs) deleted page Batch Jobs - bwUniCluster Features test (content was: "<pre lang="bash"> #!/bin/bash ################################################## ## simple job run template for bwUniCluster...", and the only contributor was "R Barthel" (talk))
10:37, 6 June 2023 H Winkhardt (talk | contribs) deleted page IT-Sicherheit - bwSync&Share (content was: "Die von den Nutzern abgespeicherten Daten werden unverschlüsselt auf Speichersystemen des KIT abgelegt. Der Datenzugriff ist besch...", and the only contributor was "U Epting" (talk))
10:37, 6 June 2023 H Winkhardt (talk | contribs) deleted page IT-Sicherheit (content was: "Die Kommunikation zwischen den Endgeräten des Nutzers und den Speichersystemen des KIT erfolgt verschlüsselt. Die von den Nutzern...", and the only contributor was "U Epting" (talk))
10:36, 6 June 2023 H Winkhardt (talk | contribs) deleted page Betriebszeit/Servicezeit/Reaktionszeit/Verfügbarkeit - bwSync&Share (content was: "Der Dienst wird rund um die Uhr betrieben. Geplante Dienstunterbrechungen (z.B. für Wartungsarbeiten) werden im Voraus mit einer F...", and the only contributor was "U Epting" (talk))
10:36, 6 June 2023 H Winkhardt (talk | contribs) deleted page Betriebszeit/Servicezeit/Reaktionszeit/Verfügbarkeit (content was: "Der Dienst wird rund um die Uhr betrieben. Geplante Dienstunterbrechungen (z.B. für Wartungsarbeiten) werden im Voraus mit einer F...", and the only contributor was "U Epting" (talk))
10:32, 6 June 2023 H Winkhardt (talk | contribs) deleted page Wie kann ich den Dienst wieder abbestellen, wenn ich ihn nicht mehr brauche? (content was: "Wenn ein Benutzer den Dienst nicht weiter verwenden möchte, kann er über die Seite https://bwidm.scc.kit.edu abbestellt werden....", and the only contributor was "U Epting" (talk))
10:30, 6 June 2023 H Winkhardt (talk | contribs) deleted page bwHPC Wiki:Orca (content was: "#REDIRECT bwHPC Wiki:Software skeleton-page", and the only contributor was "R Barthel" (talk))
10:29, 6 June 2023 H Winkhardt (talk | contribs) deleted page BwUniCluster Maintenance: 10/2016 (content was: "#REDIRECT 2016-10-17: bwUniCluster Maintenance", and the only contributor was "R Barthel" (talk))
10:29, 6 June 2023 H Winkhardt (talk | contribs) deleted page 2017-03-20: bwUniCluster downtime (content was: "#REDIRECT 2017-03-20: bwUniCluster Maintenance", and the only contributor was "R Barthel" (talk))
10:27, 6 June 2023 H Winkhardt (talk | contribs) deleted page DDT (content was: "#REDIRECT Forge", and the only contributor was "R Barthel" (talk))
10:27, 6 June 2023 H Winkhardt (talk | contribs) deleted page Ddt (content was: "#REDIRECT Forge")
10:26, 6 June 2023 H Winkhardt (talk | contribs) deleted page Spark (content before blanking was: "= Introduction to Spark = Apache Spark is a framework for large-scale data processing. The project Spark is created by University of California, Berkeley’s AMP Lab and later donated to Apache Software Foundation. Hado...")
10:26, 6 June 2023 H Winkhardt (talk | contribs) deleted page Apache Flink (content before blanking was: "= Introduction to Flink = Apache Flink is described on their website as ‘an open-source stream processing frame- work for distributed, high-performing, always-available, and accurate data streaming applications. This it...")
10:26, 6 June 2023 H Winkhardt (talk | contribs) deleted page BwHPC BPG for Data processing (content before blanking was: " This page will provide information regarding the large-scale data processing tools. <br> More informations about the large-scale data processing tools installed in our clusters are available here: * Spark| Apache Spa...")
10:26, 6 June 2023 H Winkhardt (talk | contribs) deleted page Stata (content before blanking was: "{{Softwarepage|math/stata}} {| width=760px class="wikitable" |- ! Description !! Content |- | module load | math/stata |- | License | Commercial. |- | Citing | n/a |- | Links | [https://www.stata.com Homepage] | [h...")
10:25, 6 June 2023 H Winkhardt (talk | contribs) deleted page Hardware and Architecture (bwForCluster JUSTUS 2 (content before blanking was: "{{Justus2}} = System Architecture = The bwForCluster JUSTUS 2 is a state-wide high-performance compute resource dedicated to Computational Chemistry and Quantum Sciences. {| style="margin: 1em auto 1em auto;" |Image:...")
10:25, 6 June 2023 H Winkhardt (talk | contribs) deleted page BwForCluster MLS&WISO Production Slurm (content before blanking was: "= General information about Slurm = * Slurm documentation: https://slurm.schedmd.com/documentation.html * Slurm cheat sheet: https://slurm.schedmd.com/pdfs/summary.pdf * Slurm tutorials: https://slurm.schedmd.com/tutorial...")
10:25, 6 June 2023 H Winkhardt (talk | contribs) deleted page VNC Server - bwForCluster Chemistry - 3D Acceleration (content before blanking was: "== Start a VNC Server on the bwForCluster Chemistry with 3D Acceleration == If you want to do graphically intensive tasks such as visualizing systems of molecules you should use the visualization nodes with high-performa...")
10:25, 6 June 2023 H Winkhardt (talk | contribs) deleted page VNC Server - bwForCluster Chemistry (content before blanking was: "== Start a VNC Server on the bwForCluster Chemistry == To start a VNC Server on the bwForCluster Chemistry you must log into the cluster using your username and password. You have to start the VNC Server on a login node...")
10:25, 6 June 2023 H Winkhardt (talk | contribs) deleted page GROMACS (content before blanking was: "{{Softwarepage|chem/gromacs}} {| width=760px class="wikitable" |- ! Description !! Content |- | module load | chem/gromacs |- | License | Open-source software, distributed under the GNU Lesser General Public License (LGP...")
10:25, 6 June 2023 H Winkhardt (talk | contribs) deleted page Gromacs (content was: "#REDIRECT GROMACS", and the only contributor was "R Rutka" (talk))
10:25, 6 June 2023 H Winkhardt (talk | contribs) deleted page Open Babel (content before blanking was: "{| width=600px class="wikitable" |- ! Description !! Content |- | module load | chem/openbabel |- | Availability | BwForCluster_JUSTUS_2 |- | License | [https://en.wikipedia.org/wiki/GNU_General_Public_License GPL] |-...")
10:25, 6 June 2023 H Winkhardt (talk | contribs) deleted page GAMESS (content before blanking was: "{{Softwarepage|chem/gamess}} {| width=760px class="wikitable" |- ! Description !! Content |- | module load | chem/gamess |- | Availability | BwForCluster_JUSTUS_2 |- | License | Source-available freeware, distributed...")
10:25, 6 June 2023 H Winkhardt (talk | contribs) deleted page Gamess (content before blanking was: "#REDIRECT GAMESS")
10:24, 6 June 2023 H Winkhardt (talk | contribs) deleted page BwForCluster MLS&WISO Production 2FA tokens (content before blanking was: "#REDIRECT Registration/2FA")
10:24, 6 June 2023 H Winkhardt (talk | contribs) deleted page BwForCluster MLS&WISO Production SSH keys (content before blanking was: " {| style="width: 100%; margin:4px 0 0 0; background:none; border-spacing: 0px;" | style="width:100%; border:1px solid #BBBBBB; background:#fff5fa; vertical-align:top; color:#000;" | {| style="wid...")
10:24, 6 June 2023 H Winkhardt (talk | contribs) deleted page Registration/bwForCluster/MLS WISO (content before blanking was: "= Registration at the bwForCluster MLS&WISO = {|style="background:#deffee; width:100%;" |style="padding:5px; background:#cef2e0; text-align:left"| center|25px |style="padding:5px; background:#ce...")
10:24, 6 June 2023 H Winkhardt (talk | contribs) deleted page QuantumEspresso/Helix (content before blanking was: "This is a demo page for sub-pages with cluster-specific information == Disk Usage == Quantum Espresso doesnt use and disk because it is not installed")
10:24, 6 June 2023 H Winkhardt (talk | contribs) deleted page Devel/GCC (content before blanking was: "#REDIRECT Development/GCC")
10:24, 6 June 2023 H Winkhardt (talk | contribs) deleted page General compiler usage (content before blanking was: "#REDIRECT Development/General compiler usage")
10:24, 6 June 2023 H Winkhardt (talk | contribs) deleted page BwHPC BPG for Parallel Programming (content before blanking was: "#REDIRECT Development/Parallel Programming")
10:23, 6 June 2023 H Winkhardt (talk | contribs) deleted page LSDF Online Storage NFS (content before blanking was: "<H1>Using NFS</H1> NFS protocol supported KIT intern for project storage. '''Example (NFS mount)''' <pre> mount -o nfsver=3 os.lsdf.kit.edu:/lsdf01/lsdf/inst/projects /mnt/mountpoint </pre> '''Example (/etc/fstab)'''...")
10:23, 6 June 2023 H Winkhardt (talk | contribs) deleted page LSDF Online Storage Quota (content before blanking was: "<H1> Quota settings</H1> <H2> LSDF User Storage</H2> Dafaul User qouta (per user) : soft limit = 100GB, hard limit = 400GB A user can query his user quota on the login cluster: <pre> >ssh loginname@os-login.lsdf.kit....")
10:23, 6 June 2023 H Winkhardt (talk | contribs) deleted page LSDF Online Storage rdata (content before blanking was: "<H1> Access to the Filesystem LSDF Online Storage from HPC-Cluster</H1> Users of the filesystem LSDF Online Storage can furthermore transfer data to '''bwUniCluster''' and '''ForHLR''' via the tool '''rdata'''. Therefor...")
10:23, 6 June 2023 H Winkhardt (talk | contribs) deleted page LSDF Online Storage Filesystem (content before blanking was: "Some of the characteristics of the file systems are shown in Table. '''LSDF User Storage''' {| style="width:100%; vertical-align:top; background:#f5fffa;border:1px solid #000000;padding:1px" |- style="width:20%;height=20...")
10:23, 6 June 2023 H Winkhardt (talk | contribs) deleted page LSDF Online Storage Login Cluster (content before blanking was: "'''Cluster name:''' os-login.lsdf.kit.edu<br> ('''IPs:'''141.52.212.82, 141.52.212.83, 141.52.212.84) <br> '''Monitoring:'''<br> [http://lsdfmon.scc.kit.edu/ganglia/?c=Server&h=lsdf-41-190-dis.lsdf.kit.edu&m=load_one&r=ho...")
10:23, 6 June 2023 H Winkhardt (talk | contribs) deleted page LSDF Online Storage Backup (content before blanking was: "There are regular backups of all data of the LSDF Online Storage directories. <hr> <br> <br> <br> <br> Backup")
10:23, 6 June 2023 H Winkhardt (talk | contribs) deleted page LSDF Online Storage Snapshots (content before blanking was: "Snapshots are used to create a point-in-time copy of a file system or file sets. Snapshots can be used to quickly restore files or folders that were unintentionally deleted. Snapshots also provide a form of file versionin...")
10:23, 6 June 2023 H Winkhardt (talk | contribs) deleted page LSDF Online Storage RoboMirror (content before blanking was: "RoboMirror's aim is to provide a very simple and user-centered GUI for Robocopy to allow for easy synchronization of two directory trees, e.g., to perform a robust incremental backup across the network (e.g., to LSDF Onli...")
10:23, 6 June 2023 H Winkhardt (talk | contribs) deleted page LSDF Online Storage rsync (content before blanking was: "<H1>Using rsync from UNIX client via the login-cluster</H1> '''rsync''' is a fast and extraordinarily versatile file copying tool. It can copy locally, to/from another host over any remote shell, or to/from a remote '''...")
10:23, 6 June 2023 H Winkhardt (talk | contribs) deleted page LSDF Online Storage lftp (content before blanking was: "<H1>Using lftp from UNIX client</H1> '''lftp''' is a command-line file transfer program (FTP client) for UNIX and Unix-like systems. Besides FTP, it also supports HTTP, HTTPS and '''SFTP''' etc. In addition to feature...")
10:23, 6 June 2023 H Winkhardt (talk | contribs) deleted page LSDF Online Storage SSHFS (content before blanking was: "<H1>Using SSHFS for UNIX Client</H1> <H2>Installation</H2> In most linux distributions you could install a package for fuse mounting a network drive. ''''Example (debian/ubuntu):''' <br> <pre> > apt-get install sshfs <...")
10:22, 6 June 2023 H Winkhardt (talk | contribs) deleted page LSDF Online Storage CIFS (content before blanking was: "<H1> Using SMB/CIFS for UNIX client (only KIT intern or KIT-VPN)</H1> <H2>SMB Client</H2> '''Attention:''' To access data served by LSDF_Online_Storage via '''smbclient''', You need a '''''Service Password'''''. Please...")
10:22, 6 June 2023 H Winkhardt (talk | contribs) deleted page LSDF Online Storage SSH (content before blanking was: "<H1>Using SSH from Unix client</H1> '''Access login cluster:''' os-login.lsdf.kit.edu '''Example:''' <pre> >ssh -p 22 xy1234@os-login.lsdf.kit.edu </pre> Access per ssh key: '''Example:''' <pre> >ssh-keygen -b 2048 -t...")
10:22, 6 June 2023 H Winkhardt (talk | contribs) deleted page LSDF Online Storage SFTP (content before blanking was: "<H1>Using SFTP from Unix client</H1> '''Example:''' <pre> > sftp xy1234@os-login.lsdf.kit.edu Connecting to os-login.lsdf.kit.edu<br> xy1234@os-login.lsdf.kit.edu's password: sftp> ls snapshots temp test sftp> help .....")
10:22, 6 June 2023 H Winkhardt (talk | contribs) deleted page LSDF Online Storage SCP (content before blanking was: "<H1>Using SCP from Unix client</H1> This section describes how a user can connect to a LSDF environment while using the SCP protocol. Prerequisite is that a SCP client is available (installed) and working. To copy data...")
10:22, 6 June 2023 H Winkhardt (talk | contribs) deleted page Tecplot (content before blanking was: "{| width=600px class="wikitable" |- ! Description !! Content |- | module load | vis/tecplot |- | Availability | bwUniCluster |- | License | KIT-License |- | Citing | n/a |- | Links | [http://www.tecplot.com Tecplot H...")
10:22, 6 June 2023 H Winkhardt (talk | contribs) deleted page Resource Managers (content before blanking was: "== TORQUE Resource Manager == The '''T'''erascale '''O'''pen-source '''R'''esource and '''QUE'''ue Manager ([http://www.adaptivecomputing.com/products/open-source/torque/ TORQUE]) is a distributed resource manager providi...")
10:22, 6 June 2023 H Winkhardt (talk | contribs) deleted page Text editors (content before blanking was: "Text editors are used to edit files and scripts on bwHPC clusters. Some of them are with GUI and some of them are not. == Without GUI == * vim * nano == With GUI == Note that using GUI application require SSH login wi...")
10:22, 6 June 2023 H Winkhardt (talk | contribs) deleted page Relion (content before blanking was: "{{Softwarepage|bio/relion}} {| width=760px class="wikitable" |- ! Description !! Content |- | module load | bio/relion |- | License | [http://static.fsf.org/nosvn/directory/fdl-1.3-standalone.html GNU Free Documentation...")
10:21, 6 June 2023 H Winkhardt (talk | contribs) deleted page Batch Jobs - quick guide (content before blanking was: "All calculations can be only executed as a '''batch job''' which is a scripted sequence of commands together with required run time, number of CPU cores and required memory size. Batch jobs are to be submitted to the comp...")
10:21, 6 June 2023 H Winkhardt (talk | contribs) deleted page BwForCluster MLS&WISO Development SuperQuickStart (content before blanking was: "'''Either...''' * get an account and login * use the default gcc compiler and openmpi: module load gcc module load openmpi * compile your stuff, e.g.: cd ~/work mpicc ... ./myprog.c * choose the queue: ** devel 2h...")
10:21, 6 June 2023 H Winkhardt (talk | contribs) deleted page BwForCluster MLS&WISO Development Batch Jobs (content before blanking was: "= Introduction = To allow the use of the computational resources by several users, the resources are split spatially (=number of nodes) and temporally in items that are called jobs. Each job can request exclusive usage of...")
10:21, 6 June 2023 H Winkhardt (talk | contribs) deleted page BwForCluster MLS&WISO Development Software Modules (content before blanking was: "= Introduction = Compilation and running of parallel programs often require certain environmental variables to be set, such that programs (PATH), shared libraries (LD_LIBRARY_PATH) and man pages (MANPATH) can be found. A...")
10:21, 6 June 2023 H Winkhardt (talk | contribs) deleted page BwForCluster MLS&WISO Development Contact (content before blanking was: "For assistance regarding access to and usage of the bwForCluster MLS&WISO Development, please send an e-mail to [mailto:bwfor-support@iwr.uni-heidelberg.de bwfordev-support]. [[Category:bwForCluster_MLS&WISO_Development]...")
10:21, 6 June 2023 H Winkhardt (talk | contribs) deleted page BwForCluster MLS&WISO Development Login (content before blanking was: "= Login = After Registration, the bwfordev can be accessed via Secure Shell (SSH). Only SSH is allowed for login. From linux machines, you can log in using the following command: <code> ssh...")
10:21, 6 June 2023 H Winkhardt (talk | contribs) deleted page BwForCluster MLS&WISO Development Filesystems (content before blanking was: "= File Systems = There is a storage systems for $HOME. Additionally, each compute node provides high-speed temporary storage on the node-local solid state disk on /tmp. {| class="wikitable" |- !style="width:25%" | !sty...")
10:21, 6 June 2023 H Winkhardt (talk | contribs) deleted page BwForCluster MLS&WISO Development Acknowledgement (content before blanking was: "When preparing a publication describing work that involved the usage of a bwForCluster, e.g. the bwForCluster MLS&WISO (Development), please ensure that you reference the bwHPC initiative, the bwHPC-C5 project and – if...")
10:21, 6 June 2023 H Winkhardt (talk | contribs) deleted page Trinity (content before blanking was: "not available until now... stay tuned...")
10:21, 6 June 2023 H Winkhardt (talk | contribs) deleted page Performance Reports (content before blanking was: "{| width=600px class="wikitable" |- ! Description !! Content |- | module load | devel/reports/5.0.1 |- | Availability | bwUniCluster | BwForCluster_Chemistry |- | License | Floating or server locked licences...")
10:21, 6 June 2023 H Winkhardt (talk | contribs) deleted page SAS (content before blanking was: "{| width=760px class="wikitable" |- ! Description !! Content |- | module load | math/sas |- | Availability | bwForCluster_MLS&WISO_Production |- | License | Commercial. |- | Citing | n/a |- | Links | [http://www.sas....")
10:21, 6 June 2023 H Winkhardt (talk | contribs) deleted page CummeRbund (R-package) (content before blanking was: "{| width=600px class="wikitable" |- ! Description !! Content |- | module load | bio/r_cummerbund (R-plugin only) |- | License | Artistic-2.0 |- |Citing | Citing infos... |- | Links | [http://bioconductor.org/...")
10:20, 6 June 2023 H Winkhardt (talk | contribs) deleted page RAxML (content before blanking was: "{{Softwarepage|bio/raxml}} {| width=600px class="wikitable" |- ! Description !! Content |- | module load | bio/raxml |- | License | [http://www.gnu.org/copyleft/gpl.html GPLv3] |- |Citing | RAxML | raxmlGUI |- | Li...")
10:20, 6 June 2023 H Winkhardt (talk | contribs) deleted page MrBayes (content before blanking was: "{| width=760px class="wikitable" |- ! Description !! Content |- | module load | bio/mrbayes |- | License | Free Software |- |Citing | n./a. |- | Links | [http://mrbayes.sourceforge.net/index.php MrBayes Homepage] |...")
10:20, 6 June 2023 H Winkhardt (talk | contribs) deleted page Integrative-Genomics-Viewer (content before blanking was: "{{Softwarepage|bio/igv}} {| width=600px class="wikitable" |- ! Description !! Content |- | module load | bio/igv |- | License | [https://github.com/igvteam/igv/blob/master/license.txt MIT License] |- | Citing | <small><...")
10:20, 6 June 2023 H Winkhardt (talk | contribs) deleted page GATK (content before blanking was: "{{Softwarepage|bio/gatk}} {| width=600px class="wikitable" |- ! Description !! Content |- | module load | bio/gatk |- | License | Mixed licensing mode: [https://www.broadinstitute.org/gatk/about/license.html Free for ac...")
10:20, 6 June 2023 H Winkhardt (talk | contribs) deleted page Smalt (content before blanking was: "{| width=600px class="wikitable" |- ! Description !! Content |- | module load | bio/smalt |- | Availability | bwUniCluster |- | License | [http://www.gnu.org/copyleft/gpl.html GPLv3] |- | Citing | <small>SMALT is Cop...")
10:20, 6 June 2023 H Winkhardt (talk | contribs) deleted page FastQ screen (content before blanking was: "{{Softwarepage|bio/fastq_screen}} {| width=600px class="wikitable" |- ! Description !! Content |- | module load | bio/fastq_screen |- | License | [http://www.gnu.org/copyleft/gpl.html GPLV3] |- |Citing | n./a. |- | Link...")
10:20, 6 June 2023 H Winkhardt (talk | contribs) deleted page Burrows Wheeler Aligner (content before blanking was: "{| width=1200px class="wikitable" |- ! Description !! Content |- | module load | bio/bwa (Burrows Wheeler Aligner) |- | License | [http://www.gnu.org/copyleft/gpl.html GPLV3], MIT License |- |Citing | #Citing|Citing in...")
10:20, 6 June 2023 H Winkhardt (talk | contribs) deleted page FastQC (content before blanking was: "{{Softwarepage|bio/fastqc}} {| width=600px class="wikitable" |- ! Description !! Content |- | module load | bio/fastqc |- | License | [http://www.gnu.org/copyleft/gpl.html GPLv3] |- |Citing | n./a. |- | Links | [https:/...")
10:20, 6 June 2023 H Winkhardt (talk | contribs) deleted page FastQT (content before blanking was: "{| width=600px class="wikitable" |- ! Description !! Content |- | module load | bio/fastqc |- | Availability | bwUniCluster |- | License | [http://www.gnu.org/copyleft/gpl.html GPLv3] |- |Citing | n./a. |- | Links |...")
10:19, 6 June 2023 H Winkhardt (talk | contribs) deleted page BwForCluster MLS&WISO Production Acknowledgement (content before blanking was: "When preparing a publication describing work that involved the usage of a bwForCluster, e.g. the bwForCluster MLS&WISO (Production), please ensure that you reference the bwHPC initiative, the bwHPC-S5 project and – if a...")
10:19, 6 June 2023 H Winkhardt (talk | contribs) deleted page MAP (content before blanking was: "{{Softwarepage|devel/ddt}} {| width=600px class="wikitable" |- ! Description !! Content |- | module load | devel/ddt |- | License | Floating or server locked licences for developers and users. | [http://www.allinea....")
10:19, 6 June 2023 H Winkhardt (talk | contribs) deleted page IMa2p (content before blanking was: "{| width=600px class="wikitable" |- ! Description !! Content |- | module load | bio/ima2p |- | Availability | bwUniCluster |- | License | [https://github.com/arunsethuraman/ima2p/blob/master/COPYING GNU GENERAL PUBLIC...")
10:19, 6 June 2023 H Winkhardt (talk | contribs) deleted page Berkeleygw (content before blanking was: "{| width=600px class="wikitable" |- ! Description !! Content |- | module load | chem/berkeleygw |- | Availability | BwForCluster_Chemistry |- | License | BerkeleyGW, Copyright (c) |- | Citing | [http://w...")
10:19, 6 June 2023 H Winkhardt (talk | contribs) deleted page Omnet (content before blanking was: "{{Softwarepage|cae/omnet}} {| width=600px class="wikitable" |- ! Description !! Content |- | module load | cae/omnet |- | License | [https://omnetpp.org/doc/omnetpp/manual/usman.html#sec101 OMNeT++ is free only for acade...")
10:19, 6 June 2023 H Winkhardt (talk | contribs) deleted page Fastsimcoal (content before blanking was: "{| width=700px class="wikitable" |- ! Description !! Content |- | module load | bio/fastsimcoal |- | License | Freely available |- | Citing |<small><small> fastsimcoal2 and fsc22:<br> Excoffier, L., Dupanloup, I., Huerta-...")
10:19, 6 June 2023 H Winkhardt (talk | contribs) deleted page Amber (content before blanking was: "#REDIRECT Software Modules")
10:19, 6 June 2023 H Winkhardt (talk | contribs) deleted page BwForCluster MLS&WISO Production (content before blanking was: "#REDIRECT Category:BwForCluster_MLS&WISO_Production")
10:19, 6 June 2023 H Winkhardt (talk | contribs) deleted page BwForCluster MLS&WISO (content before blanking was: "#REDIRECT Category:BwForCluster_MLS&WISO_Production")
10:19, 6 June 2023 H Winkhardt (talk | contribs) deleted page Structure (content before blanking was: "{{Softwarepage|bio/structure}} {| class="wikitable" |- ! Description !! Content |- | module load | bio/structure |- | License | Free Software |- |Citing |<small><small>The basic algorithm was described by Pritchard, Step...")
10:18, 6 June 2023 H Winkhardt (talk | contribs) deleted page BwForCluster MLS&WISO Production Login (content before blanking was: "= Login = == Prerequisites for login == * You have registered your account at the registration server for MLS&WISO. ** If this is still missing, then please log in to the [https://wiki.bwhpc.de/e/BwForCluster_User_Acces...")
10:18, 6 June 2023 H Winkhardt (talk | contribs) deleted page Swissprot Database (content before blanking was: "{{Softwarepage|dbdata/swissprot}} {| width=600px class="wikitable" |- ! Description !! Content |- | module load | dbdata/swissprot |- | License | [http://www.calculate-linux.org/packages/licenses/swiss-prot Public Domain...")
10:18, 6 June 2023 H Winkhardt (talk | contribs) deleted page BwForCluster MLS&WISO Production Batch Jobs (content before blanking was: "'''October 2020: This page is outdated. bwForCluster MLS&WISO Production migrated to Slurm. ''' = Job Submission = This page describes the details of the queuing system specific to the bwForCluster MLS&WISO (Production)...")
10:18, 6 June 2023 H Winkhardt (talk | contribs) deleted page BwForCluster MLS&WISO Production Filesystems (content before blanking was: "= File Systems = There is one storage system for $HOME and for workspaces providing a large parallel file system based on [https://www.ibm.com/support/knowledgecenter/STXKQY/ibmspectrumscale_welcome.html IBM Spectrum Sca...")
10:18, 6 June 2023 H Winkhardt (talk | contribs) deleted page Fasta (content before blanking was: "{| width=600px class="wikitable" |- ! Description !! Content |- | module load | bio/fasta/36.3.8 |- | License | [http://www.apache.org/licenses/LICENSE-2.0 Apache License] |- | Citing |<small><small>Code in the smith_wate...")
10:18, 6 June 2023 H Winkhardt (talk | contribs) deleted page Contact and Support (bwForCluster MLS&WISO) (content before blanking was: "#REDIRECT BwForCluster MLS&WISO Production Contact")
10:18, 6 June 2023 H Winkhardt (talk | contribs) deleted page BwForCluster MLS&WISO Development Hardware (content before blanking was: "== System Architecture == The development part of bwForCluster MLS&WISO is a high performance supercomputer dedicated to the development of methods for scientific computing in all research fields. It consists of unified...")
10:18, 6 June 2023 H Winkhardt (talk | contribs) deleted page BwForCluster MLS&WISO Production Hardware (content before blanking was: "== System Architecture == The production part of bwForCluster MLS&WISO is a high performance supercomputer dedicated to research in Molecular Life Science, Economics, and Social Sciences. It features different types of c...")
10:18, 6 June 2023 H Winkhardt (talk | contribs) deleted page Bowtie2 (content before blanking was: "{{Softwarepage|bio/bowtie2}} {| width=650px class="wikitable" |- ! Description !! Content |- | module load | bio/bowtie2 |- | License | Artistic License/GPLv3 |- | Citing |<small><small> Langmead B, Salzberg...")
10:17, 6 June 2023 H Winkhardt (talk | contribs) deleted page Highlighting test (content before blanking was: "<syntaxhighlight lang=bash> #!/bin/bash ################################################## ## simple MPI job run template for bwUniCluster ## ################################################## ## ver. : 2015-02-25, Rober...")
10:17, 6 June 2023 H Winkhardt (talk | contribs) deleted page BwForCluster MLS&WISO Production Contact (content before blanking was: "==General Support== For assistance regarding access to and usage of the bwForCluster MLS&WISO Production, please open a ticket via [https://bw-support.scc.kit.edu/ bwSupport Portal]. <!-- ==Mailing Lists== If you would...")
10:17, 6 June 2023 H Winkhardt (talk | contribs) deleted page Hardware and Architecture (bwForCluster MLS&WISO) (content before blanking was: "#REDIRECT BwForCluster_MLS&WISO_Production_Hardware")
10:17, 6 June 2023 H Winkhardt (talk | contribs) deleted page BwHPC BPG Data Management (content before blanking was: "= Local File Systems = In addition to computing capacity, each bwHPC cluster is equipped with a parallel file system. For local data management it is important to differentiate if data is frequently used and persistent o...")
10:17, 6 June 2023 H Winkhardt (talk | contribs) deleted page BwFileStorage RoboMirror (content before blanking was: "RoboMirror's aim is to provide a very simple and user-centered GUI for Robocopy to allow for easy synchronization of two directory trees, e.g., to perform a robust incremental backup across the network (e.g., to bwfilesto...")
10:17, 6 June 2023 H Winkhardt (talk | contribs) deleted page BwFileStorage lftp (content before blanking was: "<H1>Using lftp from UNIX client</H1> '''lftp''' is a command-line file transfer program (FTP client) for UNIX and Unix-like systems. Besides FTP, it also supports HTTP, HTTPS and '''SFTP''' etc. In addition to feature...")
10:17, 6 June 2023 H Winkhardt (talk | contribs) deleted page BwFileStorage Filesystem (content before blanking was: "Some of the characteristics of the file systems are shown in Table. {| style="width:100%; vertical-align:top; background:#f5fffa;border:1px solid #000000;padding:1px" |- style="width:20%;height=20px; text-align:left;padd...")
10:17, 6 June 2023 H Winkhardt (talk | contribs) deleted page BwFileStorage Login Cluster (content before blanking was: "'''Cluster name:''' bwfilestorage-login.lsdf.kit.edu<br> ('''IPs:'''141.52.212.68, 141.52.212.69, 141.52.212.70, 141.52.212.71) <br> '''Monitoring:'''<br> [http://lsdfmon.scc.kit.edu/ganglia/?c=Server&h=bwfilestorage-logi...")
10:17, 6 June 2023 H Winkhardt (talk | contribs) deleted page BwFor Registration (content before blanking was: " == Permitted User Groups == The bwForClusters are financed via a grant-proposal at the Deutsche Forschungsgesellschaft DFG. They are sponsored in half by the Minestry of Science, Research and Arts of Badenwürttenberg....")
10:16, 6 June 2023 H Winkhardt (talk | contribs) deleted page BwForCluster Chemistry Login (content before blanking was: " = Login = After registration (registration procedure at bwForCluster User Access, the bwForCluster Chemistry can be accessed via ssh. Only the secure shell ssh is allowed for login. From linux machines, you...")
10:16, 6 June 2023 H Winkhardt (talk | contribs) deleted page BwGRiD User Access (content before blanking was: "'''[http://www.bw-grid.de/das-bwgrid/verbliebene-standorte/ bwGRiD Clusters]''' are Baden-Württemberg's tier 3 high performance computing (HPC) clusters. In the near future these clusters will be replaced by the bwUniClu...")
10:16, 6 June 2023 H Winkhardt (talk | contribs) deleted page BwFileStorage SSHFS (content before blanking was: "<H1>Using SSHFS for UNIX Client</H1> <H2>Installation</H2> Each distribution (RedHat, Suse,...) may have an own sshfs package in their preferred repository. '''Downloads:''' http://fuse.sourceforge.net/sshfs.html <br>...")
10:16, 6 June 2023 H Winkhardt (talk | contribs) deleted page Batch Jobs - bwForCluster Chemistry Features (content before blanking was: "This page describes batch job options and properties of the applicable to the bwForCluster Justus (Computational and Theoretical Chemistry). A general description on options that should work on all bwHPC clusters can be...")
10:16, 6 June 2023 H Winkhardt (talk | contribs) deleted page File Systems (bwForCluster Chemistry) (content before blanking was: "#REDIRECTHardware_and_Architecture_(bwForCluster_Chemistry)#Storage_Architecture")
10:16, 6 June 2023 H Winkhardt (talk | contribs) deleted page Hardware and Architecture (bwForCluster Chemistry) (content before blanking was: " == System Architecture == The bwForCluster for computational and theoretical Chemistry Justus is a high-performance compute resource with high speed interconnect. It is intended for chemistry-related jobs with high memo...")
10:16, 6 June 2023 H Winkhardt (talk | contribs) deleted page BwFileStorage LSDF (content before blanking was: "#REDIRECT Category:bwFileStorage <hr> <br> <br> <br> <br> LSDF")
10:16, 6 June 2023 H Winkhardt (talk | contribs) deleted page QuTiP (content before blanking was: "{{Softwarepage|phys/qutip}} {| width=600px class="wikitable" |- ! Description !! Content |- | module load | phys/qutip |- | Availability | BwForCluster_JUSTUS_2 |- | License | [https://en.wikipedia.org/wiki/BSD_lice...")
10:15, 6 June 2023 H Winkhardt (talk | contribs) deleted page BwFileStorage WinSCP (content before blanking was: "[http://winscp.net/eng/download.php WinSCP Home-Page] WinSCP")
10:15, 6 June 2023 H Winkhardt (talk | contribs) deleted page BwFileStorage wget (content before blanking was: "<H1>Using wget from UNIX client</H1> '''wget''' is a free utility for non-interactive download of files from the Web. It supports '''https''' protocol For Help: <pre> >man wget or >wget --help ... HTTP options: --http...")
10:15, 6 June 2023 H Winkhardt (talk | contribs) deleted page Smoldyn (content before blanking was: "{| width=600px class="wikitable" |- ! Description !! Content |- | module load | chem/smoldyn |- | Availability | bwUniCluster |- | License | LGPL. See 'License'-Section in [http://www.smoldyn.org/download.html Downloa...")
10:15, 6 June 2023 H Winkhardt (talk | contribs) deleted page BwFileStorage Globus Online (content before blanking was: "'''Home page:''' https://www.globus.org <br> <br> '''Sign Up and Transfer Files with Globus Online:''' https://www.globus.org/app/SignUp <br> '''Sign In:''' https://www.globus.org/app/SignIn (Profile: non-profit research...")
10:15, 6 June 2023 H Winkhardt (talk | contribs) deleted page BwFileStorage rdata (content before blanking was: "<H1> Access to the Filesystem bwFileStorage from HPC-Cluster</H1> Users of the filesystem bwFileStorage can furthermore transfer data to '''bwUniCluster''', '''ForHLR''', '''IC2''' '''HC3''' and '''LSDFDIS''' via the to...")
10:15, 6 June 2023 H Winkhardt (talk | contribs) deleted page BwFileStorage Backup (content before blanking was: "There are regular backups of all data of the bwFileStorage directories. <hr> <br> <br> <br> <br> Backup")
10:15, 6 June 2023 H Winkhardt (talk | contribs) deleted page BwFileStorage Snapshots (content before blanking was: "Snapshots are used to create a point-in-time copy of a file system or file sets. Snapshots can be used to quickly restore files or folders that were unintentionally deleted. Snapshots also provide a form of file versionin...")
10:15, 6 June 2023 H Winkhardt (talk | contribs) deleted page BwFileStorage FAQ (content before blanking was: "FAQ")
10:15, 6 June 2023 H Winkhardt (talk | contribs) deleted page BwFileStorage Price (content before blanking was: "Price")
10:14, 6 June 2023 H Winkhardt (talk | contribs) deleted page BwFileStorage Quota (content before blanking was: "<H1> Default quota settings</H1> '''Fileset quota''' (per organisation): soft limit = '''50TB''', hard limit = '''60TB''' <br> '''User qouta''' (per user) : soft limit = '''100GB''', hard limit = '''400GB''' A use...")
10:14, 6 June 2023 H Winkhardt (talk | contribs) deleted page BwFileStorage rsync (content before blanking was: "<H1>Using rsync from UNIX client via the login-cluster</H1> Rsync is a fast and extraordinarily versatile file copying tool. It can copy locally, to/from another host over any remote shell, or to/from a remote rsync dae...")
10:14, 6 June 2023 H Winkhardt (talk | contribs) deleted page BwFileStorage CIFS (content before blanking was: "<H1> Using SMB/CIFS for UNIX client (only KIT intern or KIT-VPN)</H1> <H2>SMB Client</H2> '''Attention:''' To access data served by bwFileStorage via '''smbclient''', You need a '''''Service Password'''''. Please set y...")
10:14, 6 June 2023 H Winkhardt (talk | contribs) deleted page BwFileStorage SSH (content before blanking was: "<H1>Using SSH from Unix client</H1> '''Access login cluster:''' bwfilestorage-login.lsdf.kit.edu '''Example:''' <pre> >ssh -p 22 ka_xy1234@bwfilestorage-login.lsdf.kit.edu </pre> Access per ssh key: '''Example:''' <pr...")
10:14, 6 June 2023 H Winkhardt (talk | contribs) deleted page BwFileStorage HTTPS (content before blanking was: "<H1>Using HTTPS </H1> This section describes how a user can connect to LSDF shares using the HTTPS service. <br> '''Note:''' You can use HTTPS only for downloads. Open a browser (Internet Explorer, or Firefox), and ent...")
10:14, 6 June 2023 H Winkhardt (talk | contribs) deleted page BwFileStorage SCP (content before blanking was: "<H1>Using SCP from Unix client</H1> This section describes how a user can connect to a LSDF environment while using the SCP protocol. Prerequisite is that a SCP client is available (installed) and working. To copy data...")
10:14, 6 June 2023 H Winkhardt (talk | contribs) deleted page BwHPC BPG for Physics (content before blanking was: "#REDIRECT category:Physics_software")
10:14, 6 June 2023 H Winkhardt (talk | contribs) deleted page Cae (content before blanking was: "#REDIRECT category:Engineering_software")
10:14, 6 June 2023 H Winkhardt (talk | contribs) deleted page BwHPC BPG for Biology (content before blanking was: "#REDIRECT category:biology_software")
10:14, 6 June 2023 H Winkhardt (talk | contribs) deleted page Qiime (content before blanking was: "{| width=600px class="wikitable" |- ! Description !! Content |- | module load | bio/qiime |- | Availability | bwUniCluster |- | License | [https://github.com/biocore/qiime/blob/master/CONTRIBUTING.md Open Source] |- |...")
10:13, 6 June 2023 H Winkhardt (talk | contribs) deleted page BwHPC BPG Numerical Libraries (content before blanking was: "#REDIRECT Category:Numerical_libraries")
10:13, 6 June 2023 H Winkhardt (talk | contribs) deleted page Forge (content before blanking was: "{{Softwarepage|devel/forge}} {| width=600px class="wikitable" |- ! Description !! Content |- | module load | devel/forge (formerly devel/ddt) |- | License | Floating or server locked licences for developers and users. &#...")
10:13, 6 June 2023 H Winkhardt (talk | contribs) deleted page Obsolete Modules (content before blanking was: " {|{{Softwarebox}} |- ! colspan="2" style="text-align:center" | Modules  |- | License | GPL |- | Links | http://modules.sourceforge...")
10:13, 6 June 2023 H Winkhardt (talk | contribs) deleted page Gdb (content before blanking was: "#REDIRECT GDB")
10:13, 6 June 2023 H Winkhardt (talk | contribs) deleted page BwHPC BPG Debugger (content before blanking was: "#REDIRECT Category:Debugger software")
10:12, 6 June 2023 H Winkhardt (talk | contribs) deleted page Babel (content before blanking was: "#REDIRECT Open_Babel")
10:12, 6 June 2023 H Winkhardt (talk | contribs) deleted page BwHPC BPG Compiler (content before blanking was: "#REDIRECT Category:Compiler_software")
10:12, 6 June 2023 H Winkhardt (talk | contribs) deleted page BwHPC BPG for Engineering (content before blanking was: "#REDIRECT category:Engineering_software")
10:12, 6 June 2023 H Winkhardt (talk | contribs) deleted page Nutzungsbedingungen (content before blanking was: "==Leistungen und Nutzerkreis== Der Dienst bwSync&Share ist ein Online-Speicherdienst, der Mitarbeitern und Studierenden der Universitäten und Hochschulen im Land Baden-Württemberg zur Verfügung steht. Der Dienst ermög...")
10:12, 6 June 2023 H Winkhardt (talk | contribs) deleted page Dacapo (content before blanking was: "#REDIRECT Software Modules")
10:12, 6 June 2023 H Winkhardt (talk | contribs) deleted page BwHPC BPG Performance Analysis Tools (content before blanking was: " The bwHPC clusters offer several tools to help you with using the cluster hardware most efficiently. Several methodologies exist to gain insight into the performance of your jobs and the processes they run. == Open...")
10:12, 6 June 2023 H Winkhardt (talk | contribs) deleted page BwHPC Best Practice Repository (content before blanking was: "#REDIRECT BwHPC Best Practices Repository")
10:12, 6 June 2023 H Winkhardt (talk | contribs) deleted page BwHPC BPG Programming (content before blanking was: "#REDIRECT Category:Numerical_libraries")
10:12, 6 June 2023 H Winkhardt (talk | contribs) deleted page BwHPC best practice guides for Parallel Programming (content before blanking was: "#REDIRECT Development/Parallel Programming")
10:11, 6 June 2023 H Winkhardt (talk | contribs) deleted page Obsolete: BwUniCluster Hardware and Architecture (content before blanking was: "{| style="width: 100%; border-spacing: 5px;" | style="text-align:left; color:#000;vertical-align:top;" |__TOC__ |File:bwUniCluster_17Jan2014_p041-rot_t10.07.17.jpg|center|250px|<span style="font-size:75%;">bwUniCluster...")
10:11, 6 June 2023 H Winkhardt (talk | contribs) deleted page BPG Generic Users Guide (content before blanking was: "#REDIRECT BwHPC_Best_Practices_Repository")
10:11, 6 June 2023 H Winkhardt (talk | contribs) deleted page BwHPC Access (content before blanking was: "{| style="border-style: solid; border-width: 1px" ! Navigation: bwHPC BPR |} Currently members of Baden-Württemberg's universities can apply for access to the following ''high perfo...")
10:11, 6 June 2023 H Winkhardt (talk | contribs) deleted page BwHPC Cluster Infrastructure (content before blanking was: "{| style="border-style: solid; border-width: 1px" ! Navigation: bwHPC |} Baden-Württemberg's ''high performance computing'' cluster infrastructure consists of: * Characteristics...")
10:11, 6 June 2023 H Winkhardt (talk | contribs) deleted page BwHPC Best Practices Repository (content before blanking was: "<!-- The best practices repository of Baden-Württemberg's high performance computing (bwHPC) covers '''''generic''''' high performance computing user guides and '''''science...")
10:10, 6 June 2023 H Winkhardt (talk | contribs) deleted page Wie kann ich den Dienst wieder abbestellen? (content before blanking was: " Die Abmeldung erfolgt über https://bwidm.scc.kit.edu")
10:09, 6 June 2023 H Winkhardt (talk | contribs) deleted page BwFileStorage (content before blanking was: "#REDIRECT Category:bwFileStorage <hr> <br> <br> <br> <br> BwFileStorage")
10:09, 6 June 2023 H Winkhardt (talk | contribs) deleted page BPG BwUniCluster Karlsruhe (content before blanking was: "#REDIRECT BPG bwUniCluster Karlsruhe")
10:09, 6 June 2023 H Winkhardt (talk | contribs) deleted page Users Guide (content before blanking was: "#REDIRECT BwHPC_Best_Practices_Repository")
10:09, 6 June 2023 H Winkhardt (talk | contribs) deleted page BPG bwUniCluster Karlsruhe (content before blanking was: "== Introduction == * Please try to avoid redundancies as far as possible. * Generic information should go to Generic Best Practice Users_Guide. == System Access == === Registration === Describe registration proce...")
10:09, 6 June 2023 H Winkhardt (talk | contribs) deleted page Best Practice Repository (content before blanking was: "== Generic Best Practice Guides == * Short Introduction to bwHPC Cluster Systems * Generic Best Practice Users Guide * Generic Best Practice Guide BPG Generic Parall...")

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