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- 17:02, 7 November 2024 DACHS/Support (hist | edit) [757 bytes] R Keller (talk | contribs) (Created page with "== Support == {| style="vertical-align:top;background:#f5fffa;border:2px solid #000000;" | All longer term support issues should be handled via the established trouble ticket system: * '''[https://bw-support.scc.kit.edu/ bwSupport Portal]''' |} == Contact == For specific questions and requests, You may reach administrators via e-mail to mailto:dachs-admin@hs-esslingen.de == Issues with Two-Factor Authentication (2FA) == '''Q: How do I register/deactivate a token?'''...")
- 16:00, 7 November 2024 BwUniCluster3.0 (hist | edit) [19 bytes] S Braun (talk | contribs) (Created page with "= bwUniCluster3.0 =")
- 10:51, 6 November 2024 BinAC2/Getting Started (hist | edit) [14,009 bytes] F Bartusch (talk | contribs) (Copy and Paste getting started from BinAC to BinAC2)
- 09:49, 5 November 2024 Development/Python (hist | edit) [6,809 bytes] S Braun (talk | contribs) (Created page with " = Installation and Usage = == Available versions == == Virtual environments ==")
- 18:04, 31 October 2024 BinAC2/Login (hist | edit) [6,911 bytes] F Bartusch (talk | contribs) (Created page with "{|style="background:#deffee; width:100%;" |style="padding:5px; background:#cef2e0; text-align:left"| center|25px |style="padding:5px; background:#cef2e0; text-align:left"| Access to bwForCluster BinAC 2 is only possible from IP addresses within the [https://www.belwue.de BelWü] network which connects universities and other scientific institutions in Baden-Württemberg. If your computer is in your University network (e.g. at your office), you shou...")
- 15:12, 30 October 2024 BwUniCluster2.0/Software/R/cummeRbund (hist | edit) [5,152 bytes] K Kuck (talk | contribs) (Created page with "= General information = [https://rspatial.github.io/terra/ '''<code>CummeRbund</code>'''] is an <code>R</code> package designed to aid and simplify the task of analyzing Cufflinks RNA-Seq output. = Installation instructions = == Preparations == Installing <code>CummeRbund</code> involves compiling source code. Therefore, ensure that the following flags are set in <code>$HOME/.R/Makevars</code>: <pre> cat ~/.R/Makevars CXX14=g++ CXX17=g++ CXX14FLAGS += -std=c++14 C...")
- 15:40, 28 October 2024 BinAC/Software/Conda (hist | edit) [5,892 bytes] F Bartusch (talk | contribs) (Created page with "{| style="height:100%; background:#ffeaef; width:100%" | style="padding:2px; background:#f5dfdf; font-size:100%; font-weight:bold; text-align:left" | '''Caution''' |- | The licensing situation with Anaconda is currently unclear. To be on the safe side, make sure to not use the '''defaults''' channel |} = Use Conda Environments on BinAC = [https://conda.io/docs/index.html Conda] can be used to easily install software (usually Python packages) in dedicated environme...")
- 13:39, 28 October 2024 BwUniCluster2.0/Software/R/terra (R 4.2.1) (hist | edit) [4,560 bytes] K Kuck (talk | contribs) (Created page with " <span style="color:red"><b>Note that the instructions provided below refer to R 4.2.1 (but not R 4.3.3)! We are currently updating our guides for R 4.3.3.</b></span> = General information = sf and terra allow to use the following tools for handling spatial structures in R * the 'Geospatial' Data Abstraction Library [https://gdal.org/ GDAL] * Projection/transformation operations from the [https://proj.org/ PROJ] library * Interface to the open source Geometry Engin...")
- 12:54, 28 October 2024 DACHS/Registration (hist | edit) [1,988 bytes] R Keller (talk | contribs) (Created page with "= Registration bwUniCluster = The DACHS is the high performance computing (HPC) for Data Analysis of Universities of Applied Science in Baden-Württemberg. It is co-financed by the Ministry of Science, Research and the Arts Baden-Württemberg and the shareholders: * HS Aalen * HS Albstadt-Sigmaringen * HS Esslingen * HS Heilbronn * HS Karlsruhe * HTWG Konstanz * HS Mannheim * HS Offenburg * HS Reutlingen * HfT Stuttgart * TH Ulm All members of the shareholder unive...")
- 12:33, 28 October 2024 DACHS/Getting Started (hist | edit) [2,977 bytes] R Keller (talk | contribs) (Getting started)
- 13:48, 27 October 2024 BwUniCluster2.0/Software/R/Rgdal (R 4.2.1) (hist | edit) [4,328 bytes] K Kuck (talk | contribs) (Created page with "<span style="color:red"><b>Note that the instructions provided below refer to R 4.2.1 (but not R 4.4.1)!</b></span> = General information = <span style="color:red"><b>Note that rgdal and rgeos have been retired by their developers in 2023!</b> Please find further information at [https://cran.r-project.org/web/packages/rgdal/index.html https://cran.r-project.org/web/packages/rgdal/index.html] and [https://cran.r-project.org/web/packages/rgeos/index.html https://cran.r-p...")
- 17:45, 9 October 2024 DACHS/Hardware and Architecture (hist | edit) [1,769 bytes] R Keller (talk | contribs) (1st Version)
- 14:48, 9 October 2024 DACHS (hist | edit) [1,735 bytes] R Keller (talk | contribs) (Entry page for the Datenanalyse Cluster der Hochschulen (DACHS))
- 17:39, 8 October 2024 JUSTUS2/Software/Julia/Parallel Programming (hist | edit) [3,204 bytes] M Carmesin (talk | contribs) (Created page with "= Parallel Programming in Julia = Julia supports several paradigms of parallel programming # Implicit multi-threading by math libraries (OpenBLAS, MKL) # Explicit multi-threading using Julia threads (e.g. `Threads.@threads for`) # Multiple processes on one ore more nodes * `Distributed` package and `SlurmManager` from [`ClusterManagers.jl`](https://github.com/JuliaParallel/ClusterManagers.jl) package, `@distributed for`-loops * [`MPI.jl`](https://github.com/JuliaParall...")
- 16:41, 8 October 2024 When (not) to use a HPC Cluster (hist | edit) [2,897 bytes] K Siegmund (talk | contribs) (Created page with "My calculations take a long time - should I try using one of the bwHPC clusters for my tasks? == Misconception: "everything will be faster" == right|thumb|alt=bwUniCluster2.0 |upright=1| many compute cores: every "tray" in these racks contains 1-4 computers, every computer typically has 50-200 compute cores The performance of a single compute core is not higher than that of your typical desktop computer. The main things...") originally created as "When (not to) use a HPC Cluster"
- 14:36, 8 October 2024 .bashrc Do's and Don'ts (hist | edit) [2,051 bytes] K Siegmund (talk | contribs) (Created page with ".bashrc and .profiles are files that are sourced when you log in. You can add commands that you want to run every time by adding lines to these files, but you can also make mistakes that make your life or the life of the cluster teams harder. == Donts's == * don't forget to test your changes before you log out * don't put <code> module load </code> commands in .bashrc, modules may make changes that break the default system environment * don't put LD_PRELOAD or LIBRARY...")
- 13:34, 8 October 2024 JUSTUS2/Software/Julia (hist | edit) [3,342 bytes] M Carmesin (talk | contribs) (Created page with "{{Softwarepage|math/julia}} {| width=600px class="wikitable" |- ! Description !! Content |- | module load | math/julia |- | Availability | bwUniCluster | JUSTUS2 |- | License | MIT License |- |Citing | [https://github.com/JuliaLang/julia/blob/master/CITATION.bib] |- | Links | [https://julialang.org/ Project homepage] | [https://docs.julialang.org/en/v1/ Documentation]n] |- | Graphical Interface | No |}")
