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- 22:43, 17 December 2024 DACHS/Queues (hist | edit) [4,537 bytes] R Keller (talk | contribs) (First page describing the partitions of DACHS)
- 14:23, 5 December 2024 BwUniCluster3.0/Slurm (hist | edit) [9,515 bytes] P Schuhmacher (talk | contribs) (Created page with "__TOC__ = Slurm HPC Workload Manager = == Specification == Slurm is an open source, fault-tolerant, and highly scalable cluster management and job scheduling system for large and small Linux clusters. Slurm requires no kernel modifications for its operation and is relatively self-contained. As a cluster workload manager, Slurm has three key functions. First, it allocates exclusive and/or non-exclusive access to resources (compute nodes) to users for some duration of...")
- 16:28, 4 December 2024 Helix/bwVisu/Acknowledgement (hist | edit) [894 bytes] H Schumacher (talk | contribs) (created page)
- 16:27, 4 December 2024 Helix/bwVisu/KI-Morph (hist | edit) [1,350 bytes] H Schumacher (talk | contribs) (created page)
- 16:22, 4 December 2024 Helix/bwVisu/RStudio (hist | edit) [510 bytes] H Schumacher (talk | contribs) (created page)
- 16:17, 4 December 2024 Helix/bwVisu/JupyterLab (hist | edit) [5,344 bytes] H Schumacher (talk | contribs) (created page)
- 16:08, 4 December 2024 Helix/bwVisu/Usage (hist | edit) [3,734 bytes] H Schumacher (talk | contribs) (created page)
- 15:44, 4 December 2024 Helix/bwVisu/Getting Started (hist | edit) [3,707 bytes] H Schumacher (talk | contribs) (created page)
- 15:30, 4 December 2024 Helix/bwVisu (hist | edit) [1,698 bytes] H Schumacher (talk | contribs) (created page)
- 17:45, 3 December 2024 BinAC2/SLURM Partitions (hist | edit) [1,996 bytes] F Bartusch (talk | contribs) (Create stub)
- 14:34, 3 December 2024 BinAC2/Slurm (hist | edit) [30,701 bytes] F Bartusch (talk | contribs) (Copy&Paste of the bwUniCluster Slurm page.)
- 11:28, 3 December 2024 BinAC2/Software (hist | edit) [1,087 bytes] F Bartusch (talk | contribs) (Begin BinAC 2 software page)
- 02:31, 29 November 2024 SDS@hd/Access/SMB (hist | edit) [13,362 bytes] H Schumacher (talk | contribs) (new version of CIFS page; added intro sentence; adjusted Mac and Windows sections)
- 01:25, 29 November 2024 Data Transfer/Rsync (hist | edit) [1,652 bytes] H Schumacher (talk | contribs) (created page)
- 17:51, 28 November 2024 Data Transfer/Graphical Clients (hist | edit) [3,694 bytes] H Schumacher (talk | contribs) (created page)
- 09:47, 28 November 2024 BwUniCluster3.0/Batch Queues (hist | edit) [6,297 bytes] S Braun (talk | contribs) (Created page with "__TOC__ == sbatch -p ''queue'' == Compute resources such as (wall-)time, nodes and memory are restricted and must fit into '''queues'''. Since requested compute resources are NOT always automatically mapped to the correct queue class, '''you must add the correct queue class to your sbatch command '''. <font color=red>The specification of a queue is obligatory on BwUniCluster 2.0.</font> <br> Details are: {| width=750px class="wikitable" ! colspan="5" | bwUniCluster 2....")
- 13:20, 27 November 2024 Data Transfer/SCP (hist | edit) [886 bytes] H Schumacher (talk | contribs) (created page)
- 14:34, 26 November 2024 BwUniCluster3.0/Hardware and Architecture (hist | edit) [28,462 bytes] S Braun (talk | contribs) (Created page with "= Architecture of bwUniCluster 3.0 = The bwUniCluster 3.0 is a parallel computer with distributed memory. Each node of system consists of at least two Intel Xeon processor, local memory, disks, network adapters and optionally accelerators (NVIDIA Tesla V100, A100 or H100). All nodes are connected by a fast InfiniBand interconnect. In addition the file system Lustre, that is connected by coupling the InfiniBand of the file server with the InfiniBand switch of the compute...")
- 18:35, 25 November 2024 Data Transfer/All Data Transfer Routes (hist | edit) [3,856 bytes] H Schumacher (talk | contribs) (created page)
- 18:11, 25 November 2024 Data Transfer/Advanced Data Transfer (hist | edit) [1,850 bytes] H Schumacher (talk | contribs) (created page)
- 20:31, 21 November 2024 Data Transfer/SSHFS (hist | edit) [3,351 bytes] H Schumacher (talk | contribs) (created page)
- 20:17, 21 November 2024 Data Transfer/SFTP (hist | edit) [544 bytes] H Schumacher (talk | contribs) (created page)
- 20:01, 21 November 2024 Data Transfer/WebDAV (hist | edit) [3,050 bytes] H Schumacher (talk | contribs) (created page)
- 18:36, 21 November 2024 Data Transfer/Rclone (hist | edit) [4,431 bytes] H Schumacher (talk | contribs) (Created page)
- 09:46, 11 November 2024 DACHS/Login (hist | edit) [8,534 bytes] M Kunzelmann (talk | contribs) (create login page)
- 17:02, 7 November 2024 DACHS/Support (hist | edit) [757 bytes] R Keller (talk | contribs) (Created page with "== Support == {| style="vertical-align:top;background:#f5fffa;border:2px solid #000000;" | All longer term support issues should be handled via the established trouble ticket system: * '''[https://bw-support.scc.kit.edu/ bwSupport Portal]''' |} == Contact == For specific questions and requests, You may reach administrators via e-mail to mailto:dachs-admin@hs-esslingen.de == Issues with Two-Factor Authentication (2FA) == '''Q: How do I register/deactivate a token?'''...")
- 16:00, 7 November 2024 BwUniCluster3.0 (hist | edit) [3,964 bytes] S Braun (talk | contribs) (Created page with "= bwUniCluster3.0 =")
- 10:51, 6 November 2024 BinAC2/Getting Started (hist | edit) [14,009 bytes] F Bartusch (talk | contribs) (Copy and Paste getting started from BinAC to BinAC2)
- 09:49, 5 November 2024 Development/Python (hist | edit) [8,976 bytes] S Braun (talk | contribs) (Created page with " = Installation and Usage = == Available versions == == Virtual environments ==")
- 18:04, 31 October 2024 BinAC2/Login (hist | edit) [6,970 bytes] F Bartusch (talk | contribs) (Created page with "{|style="background:#deffee; width:100%;" |style="padding:5px; background:#cef2e0; text-align:left"| center|25px |style="padding:5px; background:#cef2e0; text-align:left"| Access to bwForCluster BinAC 2 is only possible from IP addresses within the [https://www.belwue.de BelWü] network which connects universities and other scientific institutions in Baden-Württemberg. If your computer is in your University network (e.g. at your office), you shou...")
- 15:12, 30 October 2024 BwUniCluster2.0/Software/R/cummeRbund (hist | edit) [5,152 bytes] K Kuck (talk | contribs) (Created page with "= General information = [https://rspatial.github.io/terra/ '''<code>CummeRbund</code>'''] is an <code>R</code> package designed to aid and simplify the task of analyzing Cufflinks RNA-Seq output. = Installation instructions = == Preparations == Installing <code>CummeRbund</code> involves compiling source code. Therefore, ensure that the following flags are set in <code>$HOME/.R/Makevars</code>: <pre> cat ~/.R/Makevars CXX14=g++ CXX17=g++ CXX14FLAGS += -std=c++14 C...")
- 15:40, 28 October 2024 BinAC/Software/Conda (hist | edit) [5,892 bytes] F Bartusch (talk | contribs) (Created page with "{| style="height:100%; background:#ffeaef; width:100%" | style="padding:2px; background:#f5dfdf; font-size:100%; font-weight:bold; text-align:left" | '''Caution''' |- | The licensing situation with Anaconda is currently unclear. To be on the safe side, make sure to not use the '''defaults''' channel |} = Use Conda Environments on BinAC = [https://conda.io/docs/index.html Conda] can be used to easily install software (usually Python packages) in dedicated environme...")
- 13:39, 28 October 2024 BwUniCluster2.0/Software/R/terra (R 4.2.1) (hist | edit) [4,560 bytes] K Kuck (talk | contribs) (Created page with " <span style="color:red"><b>Note that the instructions provided below refer to R 4.2.1 (but not R 4.3.3)! We are currently updating our guides for R 4.3.3.</b></span> = General information = sf and terra allow to use the following tools for handling spatial structures in R * the 'Geospatial' Data Abstraction Library [https://gdal.org/ GDAL] * Projection/transformation operations from the [https://proj.org/ PROJ] library * Interface to the open source Geometry Engin...")
- 12:54, 28 October 2024 DACHS/Registration (hist | edit) [1,988 bytes] R Keller (talk | contribs) (Created page with "= Registration bwUniCluster = The DACHS is the high performance computing (HPC) for Data Analysis of Universities of Applied Science in Baden-Württemberg. It is co-financed by the Ministry of Science, Research and the Arts Baden-Württemberg and the shareholders: * HS Aalen * HS Albstadt-Sigmaringen * HS Esslingen * HS Heilbronn * HS Karlsruhe * HTWG Konstanz * HS Mannheim * HS Offenburg * HS Reutlingen * HfT Stuttgart * TH Ulm All members of the shareholder unive...")
- 12:33, 28 October 2024 DACHS/Getting Started (hist | edit) [2,977 bytes] R Keller (talk | contribs) (Getting started)
- 13:48, 27 October 2024 BwUniCluster2.0/Software/R/Rgdal (R 4.2.1) (hist | edit) [4,328 bytes] K Kuck (talk | contribs) (Created page with "<span style="color:red"><b>Note that the instructions provided below refer to R 4.2.1 (but not R 4.4.1)!</b></span> = General information = <span style="color:red"><b>Note that rgdal and rgeos have been retired by their developers in 2023!</b> Please find further information at [https://cran.r-project.org/web/packages/rgdal/index.html https://cran.r-project.org/web/packages/rgdal/index.html] and [https://cran.r-project.org/web/packages/rgeos/index.html https://cran.r-p...")
- 17:45, 9 October 2024 DACHS/Hardware and Architecture (hist | edit) [1,774 bytes] R Keller (talk | contribs) (1st Version)
- 14:48, 9 October 2024 DACHS (hist | edit) [1,735 bytes] R Keller (talk | contribs) (Entry page for the Datenanalyse Cluster der Hochschulen (DACHS))
- 17:39, 8 October 2024 JUSTUS2/Software/Julia/Parallel Programming (hist | edit) [3,204 bytes] M Carmesin (talk | contribs) (Created page with "= Parallel Programming in Julia = Julia supports several paradigms of parallel programming # Implicit multi-threading by math libraries (OpenBLAS, MKL) # Explicit multi-threading using Julia threads (e.g. `Threads.@threads for`) # Multiple processes on one ore more nodes * `Distributed` package and `SlurmManager` from [`ClusterManagers.jl`](https://github.com/JuliaParallel/ClusterManagers.jl) package, `@distributed for`-loops * [`MPI.jl`](https://github.com/JuliaParall...")
- 16:41, 8 October 2024 When (not) to use a HPC Cluster (hist | edit) [2,978 bytes] K Siegmund (talk | contribs) (Created page with "My calculations take a long time - should I try using one of the bwHPC clusters for my tasks? == Misconception: "everything will be faster" == right|thumb|alt=bwUniCluster2.0 |upright=1| many compute cores: every "tray" in these racks contains 1-4 computers, every computer typically has 50-200 compute cores The performance of a single compute core is not higher than that of your typical desktop computer. The main things...") originally created as "When (not to) use a HPC Cluster"
- 14:36, 8 October 2024 .bashrc Do's and Don'ts (hist | edit) [2,051 bytes] K Siegmund (talk | contribs) (Created page with ".bashrc and .profiles are files that are sourced when you log in. You can add commands that you want to run every time by adding lines to these files, but you can also make mistakes that make your life or the life of the cluster teams harder. == Donts's == * don't forget to test your changes before you log out * don't put <code> module load </code> commands in .bashrc, modules may make changes that break the default system environment * don't put LD_PRELOAD or LIBRARY...")
- 13:34, 8 October 2024 JUSTUS2/Software/Julia (hist | edit) [3,342 bytes] M Carmesin (talk | contribs) (Created page with "{{Softwarepage|math/julia}} {| width=600px class="wikitable" |- ! Description !! Content |- | module load | math/julia |- | Availability | bwUniCluster | JUSTUS2 |- | License | MIT License |- |Citing | [https://github.com/JuliaLang/julia/blob/master/CITATION.bib] |- | Links | [https://julialang.org/ Project homepage] | [https://docs.julialang.org/en/v1/ Documentation]n] |- | Graphical Interface | No |}")
